BQ623782

Overview
NameBQ623782
Unique NameBQ623782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1277 contig Csv1_Contig1277:477..1088. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.663e-72
Identity = 133/153 (86.93%), Postives = 136/153 (88.89%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            +FYM+MQCLGAICGAGVVKGF               VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHWIFWVGPFIGAALAALYHQ+VIRAIPFKS
Sbjct:  134 VFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANT-VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.131e-71
Identity = 133/153 (86.93%), Postives = 136/153 (88.89%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            LFY+VMQCLGAICGAGVVKGF               VAHGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHWIFWVGPFIGAALAALYHQ+VIRAIPFKS
Sbjct:  134 LFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANV-VAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.292e-71
Identity = 133/153 (86.93%), Postives = 136/153 (88.89%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            +FY+VMQCLGAICGAGVVKGF               VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHWIFWVGPFIGAALAALYHQ+VIRAIPFKS
Sbjct:  133 VFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANT-VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.787e-70
Identity = 131/153 (85.62%), Postives = 135/153 (88.24%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            L+Y+VMQCLGAICGAGVVKGF               VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHW+FWVGPFIGAALAALYH VVIRAIPFKS
Sbjct:  133 LYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANT-VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.787e-70
Identity = 131/153 (85.62%), Postives = 135/153 (88.24%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            L+Y+VMQCLGAICGAGVVKGF               VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHW+FWVGPFIGAALAALYH VVIRAIPFKS
Sbjct:  133 LYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANT-VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 263.462 bits (672), Expect = 6.208e-70
Identity = 130/153 (84.97%), Postives = 135/153 (88.24%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            LFYMVMQCLGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+ H WDDHWIFWVGPFIGAALAA+YHQVVIRAIPFKS
Sbjct:  135 LFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANV-VAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKS 286
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.059e-69
Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            +FY+VMQCLGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH W+DHWIFWVGPF+GAALAA+YHQV+IRAIPFKS
Sbjct:  136 IFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANV-VASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.359e-69
Identity = 126/153 (82.35%), Postives = 136/153 (88.89%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            LFY++MQCLGA+CGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+DH W+DHWIFWVGPFIGAALAA+YHQV+IRAIPFKS
Sbjct:  136 LFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANV-VAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.024e-69
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            +FY++MQCLGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+DH W DHWIFWVGPFIGAALAA+YHQV+IRAIPFKS
Sbjct:  139 IFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANV-VAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 290
[Close]
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 8.965e-69
Identity = 128/153 (83.66%), Postives = 134/153 (87.58%), Query Frame = 2 
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            +FYMVMQ LGAICGAGVVKGF               VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++NK  GW+DHWIFWVGPFIGAALAALYHQVVIRAIPFKS
Sbjct:  136 IFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288
The following BLAST results are available for this feature:
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
PIP14_ARATH8.663e-7286.93Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_ARATH1.131e-7186.93Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH3.292e-7186.93Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_VICFA2.787e-7085.62Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.787e-7085.62Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ORYSJ6.208e-7084.97Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP11_ORYSJ1.059e-6983.01Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_MAIZE2.359e-6982.35Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE4.024e-6982.35Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP2_PEA8.965e-6983.66Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00873 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00873 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623782 ID=BQ623782; Name=BQ623782; organism=Citrus sinensis; type=EST; length=612bp
ACTTTTCTACATGGTCATGCAGTGTCTGGGAGCCATCTGTGGTGCTGGCG
TTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGGCGGCGGT
GCCAATGCTGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCTGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGTAGCGCCAGAGACTCTCATGTTCCTATTTTGGCTCCTTTGCCA
ATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCTACTATCCCTATTACCGG
AACTGGCATCAACCCCGCAAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCACGGTTGGGATGACCATTGGATTTTCTGGGTGGGACCATTCATT
GGAGCAGCACTTGCAGCTTTGTACCACCAGGTTGTGATCAGAGCCATTCC
CTTCAAATCAAGCTGATGGTCTTATGAACGGTCGTGATTGCTGATGCATT
TGTTTATGGCTGTCGTTGGTGGGTCTGTTTTATATTTTCGATTATCCCAA
GTCCATGCATTTTCGGTTCGTTAAATTTTCTGGTTGTTTGGGCTTGTGTA
TGAATTTTCTGT
back to top