BQ623812

Overview
NameBQ623812
Unique NameBQ623812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length396
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10255 contig Csv1_Contig10255:218..613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623812 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14
Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 1 
Query:  205 LDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAATMRLAA 393
            ++LD  FEQK ++AK+V EELEK M  YGY I   L+VDI PD+ V+RAMNEINAA  M+LA+
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLAS 63
The following BLAST results are available for this feature:
BLAST of BQ623812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO2.458e-1460.32Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00903 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00903 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623812 ID=BQ623812; Name=BQ623812; organism=Citrus sinensis; type=EST; length=396bp
GCAGGTCAACTCTCATTACGTGTTCAGCAGTTGGATGTTCGATGTGAAAC
AAAAACCAAGGACAATGTGTTTGTTAATGTGGTTGCTTCCGTTCAATACC
GAGCCTTGGCAGAGAAGGCTTCAGATGCCTTTTATAAGCTCAGCAATACT
AGATCGCAGATCCAAGCGTATGTCTTTGATGTTATTAGGGCAAGTGTACC
AAAGCTGGACCTGGATGCAACCTTTGAGCAGAAGAACGACATAGCCAAAG
CTGTGGAAGAGGAACTCGAAAAGGCCATGTCTCATTATGGTTATGAGATA
GTTCAAACTCTCATCGTAGATATTGAACCAGATGAACATGTGAAGAGAGC
AATGAATGAGATCAATGCAGCGGCCACAATGAGGCTGGCTGCATAT
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