BQ623816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 298.901 bits (764), Expect = 1.240e-82 Identity = 152/183 (83.06%), Postives = 163/183 (89.07%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+H+E TGNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELI++GDKVGSSEAALLAKLGIRPFSYGL VQSVY+ G Sbjct: 16 KLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNG 198 HSP 2 Score: 27.7202 bits (60), Expect = 1.240e-82 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 1 VKASKAEKKIAYDAE 45 VKA+KAEKKIAYD + Sbjct: 2 VKATKAEKKIAYDTK 16
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 3.588e-82 Identity = 151/183 (82.51%), Postives = 163/183 (89.07%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+H+E +GNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELI++GDKVGSSEAALLAKLGIRPFSYGL VQSVY+ G Sbjct: 16 KLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNG 198 HSP 2 Score: 27.7202 bits (60), Expect = 3.588e-82 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 1 VKASKAEKKIAYDAE 45 VKA+KAEKKIAYD + Sbjct: 2 VKATKAEKKIAYDTK 16
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 3.589e-82 Identity = 154/183 (84.15%), Postives = 161/183 (87.98%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLC L+EEY QILV +DNVGSNQLQNIR+GLRGDSVVLMGKNTMMKR++RMHAEKTGN A+LNLIPLL GNVGLIFTKGDL GAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGL V SVY+ G Sbjct: 17 KLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG 199 HSP 2 Score: 25.7942 bits (55), Expect = 3.589e-82 Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 4 KASKAEKKIAYDAE 45 K +KAEKKIAYDA+ Sbjct: 4 KQTKAEKKIAYDAK 17
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 6.106e-82 Identity = 152/183 (83.06%), Postives = 163/183 (89.07%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLCQLL EY+QILV AADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+HA+KTGN AFL+L+PLLQGNVGLIFTKGDL GAPARVGLVAPIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELI+KGDKVGSSEAALLAKLGIRPFSYGL V+SVY+ G Sbjct: 17 KLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNG 199 HSP 2 Score: 26.5646 bits (57), Expect = 6.106e-82 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 1 VKASKAEKKIAYDAE 45 VKA+KAEKKI YD++ Sbjct: 3 VKATKAEKKIVYDSK 17
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 5.590e-80 Identity = 153/183 (83.61%), Postives = 160/183 (87.43%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLCQLL+EYTQILV ADNVGS QLQNIR+GLRGDSVVLMGKNTMMKR++R+HAEKTGN AFLNLIPLL GNVGLIFTKG L GAPA VGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELI+KGDKVGSSEAALLAKLGIRPFSYGL V SVY+ G Sbjct: 17 KLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNG 199 HSP 2 Score: 24.6386 bits (52), Expect = 5.590e-80 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 4 KASKAEKKIAYDAE 45 KA+KAEKKI YD + Sbjct: 4 KATKAEKKIVYDGK 17
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 283.878 bits (725), Expect = 3.285e-77 Identity = 140/183 (76.50%), Postives = 160/183 (87.43%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLCQLL+EYT++L+A ADNVGSNQLQ IR+GLRGDS+VLMGKNT+++R I++HA+ TGN FL L+PLL GNVGLIFTKGDL GAPARVGLVAP+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELI+KGDKVGSSE+ALLAKLGIRPFSYGL + +VY++G Sbjct: 17 KLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSG 199 HSP 2 Score: 24.6386 bits (52), Expect = 3.285e-77 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 1 VKASKAEKKIAYD 39 +K +KAEKK+AYD Sbjct: 3 IKRTKAEKKVAYD 15
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 275.789 bits (704), Expect = 6.665e-75 Identity = 141/183 (77.05%), Postives = 157/183 (85.79%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLC LL+EYT++L+A ADNVGS QLQ+IRRGLRGDSVVLMGKNT+++R I+++AEKTGN F L+ LL GNVGLIFTKGDL GAPARVGLVAP+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT EIITPVELI+KG+KVGSSE+ALLAKLGIRPFSYGL V SVYE G Sbjct: 17 KLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVYEDG 199 HSP 2 Score: 25.0238 bits (53), Expect = 6.665e-75 Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 1 VKASKAEKKIAYD 39 +K +KAEKKIAYD Sbjct: 3 IKRTKAEKKIAYD 15
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_CHERU (60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 1.928e-74 Identity = 141/183 (77.05%), Postives = 154/183 (84.15%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 KLCQLL+EY+Q+L+A+ADNVGSNQLQ IR GLRGDS+VLMGKNTMMKR+IR+HAE TGN N+ L NVGLIFTKGDL GAPAR GLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGT EIIT VELI+KG+KVGSSEAALLAKLGIRPFSYGL V+SVY+ G Sbjct: 17 KLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLAKLGIRPFSYGLNVESVYDDG 199 HSP 2 Score: 25.409 bits (54), Expect = 1.928e-74 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 1 VKASKAEKKIAYD 39 VK +KAEKKIAYD Sbjct: 3 VKPTKAEKKIAYD 15
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_CERCA (60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.633e-49 Identity = 98/183 (53.55%), Postives = 124/183 (67.76%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 K+ +L +EY + + ADNVGS Q+QNIR LRG VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P NTGL P +TSFFQ L+IPTKI+KGT EII V +++ GDKVG+SEA LL L I PFSYGL + VY++G Sbjct: 16 KVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAIRGHLEN--NAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLAITQVYDSG 196
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Match: RLA0_DROME (60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.462e-48 Identity = 98/183 (53.55%), Postives = 125/183 (68.31%), Query Frame = 2 Query: 44 KLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTGEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLGVQSVYETG 592 K+ +L +E+ + + ADNVGS Q+QNIR LRG +VVLMGKNTMM++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP+ V++P NTGL P +TSFFQ L+IPTKI+KGT EII V +++ GDKVG+SEA LL L I PFSYGL V VY++G Sbjct: 16 KVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSG 196 The following BLAST results are available for this feature:
BLAST of BQ623816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623816 ID=BQ623816; Name=BQ623816; organism=Citrus sinensis; type=EST; length=603bpback to top |