BQ623912

Overview
NameBQ623912
Unique NameBQ623912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length409
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 5.141e-60
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 1
Query:    1 KLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 357
            KLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CN
Sbjct:  206 KLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCN 324          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.043e-36
Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1
Query:    4 LVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 354
            LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C
Sbjct:  207 LVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDC 323          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-14
Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 1
Query:   13 RLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNS 360
            RLYP  DP +N      +   CP A      V    ND  +P V DN YY ++++ +GL   D  L  DKRTR  V+  A  Q  FF  F+ A+  + + + LTGT+GEIR  C++
Sbjct:  226 RLYPNQDPTMNQFFANSLKRTCPTANSSNTQV----NDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSA 337          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 1
Query:    1 KLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNS 360
            +  +R+ P      NP     +   C ++  DP    +  ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C++
Sbjct:  209 EFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVF--NDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDA 326          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.715e-13
Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 1
Query:   43 NPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNS 360
            NP     +   C +   DP    +  ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C++
Sbjct:  211 NPRFAVALKKACANYPKDPTISVF--NDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDA 314          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.043e-13
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   76 CPDAIPDPKAVQ--YVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 357
            CP+  P  +A +  +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  242 CPEFSPTSQAAEATFVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.340e-12
Identity = 43/125 (34.40%), Postives = 61/125 (48.80%), Query Frame = 1
Query:    1 KLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNS 360
            K+ +RLY       VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD R++P V   A +   F + F  ++  L      TG+ G IR+ C +
Sbjct:  206 KVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNI-DPRVA--INMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDCGA 327          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.340e-12
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 1
Query:   28 VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNS 360
            +D +L+  +   +++KC  +      V    ND  T  V DN YYRN+  +KGL   D  L  D RTR  V+++A  ++ FF+ +S +   LS      G  GEIR+ C+S
Sbjct:  217 IDASLDNSYAETLMNKCSSSESSSLTVS---NDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSS 324          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.992e-12
Identity = 42/125 (33.60%), Postives = 63/125 (50.40%), Query Frame = 1
Query:    1 KLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNS 360
            K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD+R++P V   A +   F + F  ++  L      TG+ G IR+ C +
Sbjct:  206 KVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGA 327          
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.213e-12
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1
Query:   40 LNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 357
            +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N  TG  GE+R+ C+
Sbjct:  216 MNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCD 319          
The following BLAST results are available for this feature:
BLAST of BQ623912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PER42_ARATH5.141e-6089.08Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.043e-3658.12Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER12_ARATH1.122e-1437.93Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER63_ARATH3.265e-1435.83Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER31_ARATH4.715e-1339.62Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER29_ARATH8.043e-1338.54Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER51_ARATH2.340e-1234.40Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER46_ARATH2.340e-1234.23Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER50_ARATH3.992e-1233.60Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER6_ARATH5.213e-1234.91Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00992 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00992 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623912 ID=BQ623912; Name=BQ623912; organism=Citrus sinensis; type=EST; length=409bp
AAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCTGA
CCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCCCA
AGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGGAC
AACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTTGA
TCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGATGG
CCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACTCTC
CTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAAGGT
TTGCAATTCTTGCCAACAAGCTTCCACGACAAGTCCTAGCTAGCTAACAG
CTGCATTTA
back to top