BQ623923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623923 vs. ExPASy Swiss-Prot
Match: PSAK_MEDSA (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa GN=PSAK PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.417e-38 Identity = 77/96 (80.21%), Postives = 81/96 (84.38%), Query Frame = 2 Query: 50 GSDPKSQQPPAQSLVAAQPM-RRKCSGALGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 334 G P+ + P Q LVAAQPM RRK GALG RC FIGS TN+IMV +TTLMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLAC Sbjct: 14 GLRPQLKPSPIQGLVAAQPMTRRKGKGALGVRCDFIGSSTNVIMVASTTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLAC 109 HSP 2 Score: 30.8018 bits (68), Expect = 5.417e-38 Identity = 14/19 (73.68%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 13 MATSLMT-MPQFSGLRPQI 66 MATS+MT +PQF+GLRPQ+ Sbjct: 1 MATSMMTTLPQFTGLRPQL 19
BLAST of BQ623923 vs. ExPASy Swiss-Prot
Match: PSAK_ARATH (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana GN=PSAK PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.198e-36 Identity = 74/91 (81.32%), Postives = 79/91 (86.81%), Query Frame = 2 Query: 62 KSQQPPAQSLVAAQPMRRKCSGALGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 334 K P Q L + QPMRRK +GALGA+C FIGS TNLIMVT+TTLMLFAGRFGLAPSANRKATAGL+LE RDSGLQTGDPAGFTLADTLAC Sbjct: 19 KISAAPVQGLASVQPMRRKGNGALGAKCDFIGSSTNLIMVTSTTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLAC 109 HSP 2 Score: 24.2534 bits (51), Expect = 2.198e-36 Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 16 ATSLMTMPQFSGLR-PQISAA 75 +T + T+PQF+GLR +ISAA Sbjct: 3 STMMTTLPQFNGLRATKISAA 23
BLAST of BQ623923 vs. ExPASy Swiss-Prot
Match: PSAK_HORVU (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare GN=PSAK PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 9.534e-29 Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 2 Query: 83 QSLVAAQPMRRKCSGALGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 334 +S+ +RR+ S G RC +IGS TNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLE R+SGLQTGDPAGFTLADTLAC Sbjct: 24 RSMATLPSLRRRRSQ--GIRCDYIGSSTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLAC 105
BLAST of BQ623923 vs. ExPASy Swiss-Prot
Match: PSAK_CHLRE (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 146 GFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKL--EVRDSGLQTGDPAGFTLADTLA 331 GFIGS TNLIMV +TT L A RFGLAP+ + TAGLKL +G+ + DPAGFT+ D LA Sbjct: 28 GFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVDSKNSAGVISNDPAGFTIVDVLA 91 The following BLAST results are available for this feature:
BLAST of BQ623923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623923 ID=BQ623923; Name=BQ623923; organism=Citrus sinensis; type=EST; length=495bpback to top |