BQ623928

Overview
NameBQ623928
Unique NameBQ623928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_CITUN (V-type proton ATPase catalytic subunit A OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.731e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR
Sbjct:  472 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_ARATH (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana GN=VHA-A PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 7.524e-79
Identity = 144/152 (94.74%), Postives = 147/152 (96.71%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+ AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGE  LV KFKKL++DL AGFRALEDETR
Sbjct:  472 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFKKLYDDLNAGFRALEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_PHAAU (V-type proton ATPase catalytic subunit A OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 289.271 bits (739), Expect = 1.086e-77
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIKHR+GDLFYRLVSQKFEDPAEGE ALV +F+KLHEDL+ GFR LEDETR
Sbjct:  472 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRVGDLFYRLVSQKFEDPAEGEAALVGQFQKLHEDLSTGFRNLEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_BRANA (V-type proton ATPase catalytic subunit A OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.853e-77
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            D DFI+IRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+Y+LIKHRLGDLFYRLVSQKFEDPAEGE  LV KFKKLH+DLT+GFR LEDETR
Sbjct:  472 DSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYSLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRNLEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_GOSHI (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum GN=CVA69.24 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 5.392e-77
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            DPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNI+HF  LANQAVEK AGMDGQKITY+LIKHRLGDLFYRLVSQKFEDPAEGE ALVAKFKKL+EDLTAGFRALEDETR
Sbjct:  472 DPDFISIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQAVEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDLTAGFRALEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_DAUCA (V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 5.392e-77
Identity = 141/152 (92.76%), Postives = 146/152 (96.05%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            D DFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+YTLIKHRLGDLFYRLVSQKFEDPAEGE  LV KFKKLH+DLT+GFR LEDETR
Sbjct:  472 DSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRNLEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_BETVU (V-type proton ATPase catalytic subunit A OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.120e-73
Identity = 138/152 (90.79%), Postives = 144/152 (94.74%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            D +FI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITL+TAKLLREDYLAQNAFT YDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIK RLGDLFYRLVSQKFEDPAEGE ALVAKFKKL+EDLTA FR LEDETR
Sbjct:  472 DSEFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLDTAKLLREDYLAQNAFTAYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDALVAKFKKLNEDLTAAFRNLEDETR 623          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_MAIZE (V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.617e-73
Identity = 135/152 (88.82%), Postives = 141/152 (92.76%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            DPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHF  LANQAVE+ AG DG KITY++IKHRLGDLFYRLVSQKFEDPAEGE ALV KFKKL++DLT GFR LEDE R
Sbjct:  410 DPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQAVERAAGTDGHKITYSVIKHRLGDLFYRLVSQKFEDPAEGEEALVGKFKKLYDDLTTGFRNLEDEAR 561          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA_HORVU (V-type proton ATPase catalytic subunit A (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.405e-69
Identity = 127/152 (83.55%), Postives = 137/152 (90.13%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            DP FI++RTKAREVLQREDDLNEIVQLVGKDAL E DKITLETAKLLREDYLAQNAFTPYDK+CPFYKSVWMMRNIIHF  LANQAVE+ A  DG KITY ++K R+GDLFYRLVSQKFEDPAEGE  LVAKF+KL++DLTAGFR LEDE R
Sbjct:  429 DPGFIDMRTKAREVLQREDDLNEIVQLVGKDALGESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNQLANQAVERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQKLYDDLTAGFRNLEDEAR 580          
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Match: VATA1_ACEAT (V-type proton ATPase catalytic subunit A isoform 1 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.082e-51
Identity = 99/154 (64.29%), Postives = 123/154 (79.87%), Query Frame = 1
Query:    1 DPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA--GMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 456
            D DF+ +R  AREVLQ+ED+LNEIVQLVGKDALAE DKI LETA+ L+EDYL QN+FT YDK+CPFYKSV MMRNI+ F+ LA QA+E+ A   +DGQKIT+ +IK +LGDL Y++ SQKFEDP++GE  + A   +L+E+L   FRALEDE R
Sbjct:  460 DSDFVTLRQVAREVLQKEDELNEIVQLVGKDALAESDKIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTAAGNVDGQKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVVTAHLNELNEELKEKFRALEDEYR 613          
The following BLAST results are available for this feature:
BLAST of BQ623928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
VATA_CITUN1.731e-83100.00V-type proton ATPase catalytic subunit A OS=Citrus... [more]
VATA_ARATH7.524e-7994.74V-type proton ATPase catalytic subunit A OS=Arabid... [more]
VATA_PHAAU1.086e-7792.76V-type proton ATPase catalytic subunit A OS=Phaseo... [more]
VATA_BRANA1.853e-7792.76V-type proton ATPase catalytic subunit A OS=Brassi... [more]
VATA_GOSHI5.392e-7794.08V-type proton ATPase catalytic subunit A OS=Gossyp... [more]
VATA_DAUCA5.392e-7792.76V-type proton ATPase catalytic subunit A OS=Daucus... [more]
VATA_BETVU2.120e-7390.79V-type proton ATPase catalytic subunit A OS=Beta v... [more]
VATA_MAIZE3.617e-7388.82V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA_HORVU5.405e-6983.55V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA1_ACEAT5.082e-5164.29V-type proton ATPase catalytic subunit A isoform 1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01019 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01019 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623928 ID=BQ623928; Name=BQ623928; organism=Citrus sinensis; type=EST; length=622bp
GATCCGGATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAG
AGAAGATGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGG
CTGAAGGAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGAC
TATCTTGCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTA
CAAGTCTGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCA
ATCAGGCCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTAC
ACCCTTATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACA
GAAGTTTGAGGACCCAGCAGAAGGAGAACCAGCTCTGGTTGCTAAATTCA
AAAAGCTGCATGAGGATCTGACCGCTGGTTTCCGCGCCCTCGAGGATGAA
ACTCGATGATTGAAAGTGTCAAGTTAGATTCTTTGTAGTCCCAGCGGCAC
CTCTGATCTTACGGTAACAACAGTTGGCTTCTCGATGTTCCATTGAATGG
AGAACCAAAATGTTGGTGGGTCCATGTTATGCCCTTTTGCAGTGCTTGTT
TGGCCTTCTAGTTCAGGGTGGG
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