BQ623933

Overview
NameBQ623933
Unique NameBQ623933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 6.876e-52
Identity = 93/172 (54.07%), Postives = 124/172 (72.09%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            QRLY LAPV   F+  N++G S+ P      DKVLM+ W+ LK+ +L+GG+ FNK +GM  ++Y G D RFN VFN GMS+H+++ M+K+LE+Y GF+             ATLNMIISKYP IKGIN+DLPHV+++APSYPG+EHVGGD+F SVP+ D IFMKW+ + + D
Sbjct:  101 QRLYGLAPVCK-FLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSD 271          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.173e-51
Identity = 93/172 (54.07%), Postives = 122/172 (70.93%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLY LAPV   F+  N++G S+ P      DKVLM+ W+ LK+ ILEGG+ FNK +GM  ++Y G D RFN VFN GMS H+++ M+K+LE+YKGFE             A +N I+SKYP IKGIN+DLPHVI++APSYPG+EHVGGD+F SVP AD +FMKW+ + + D
Sbjct:  103 ERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSD 273          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.000e-51
Identity = 92/172 (53.49%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLY LAPV   F+  N++G S+ P      DKVLM+ W+ LK+ IL+GG+ FNK +GM  ++Y G D RFN VFN GMS H+++ M+K+LE+YKGFE             A +N I+SKYP IKGIN+DLPHVI++APSYPG+EHVGGD+F SVP+AD +FMKW+ + + D
Sbjct:  103 ERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSD 273          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.000e-51
Identity = 92/172 (53.49%), Postives = 126/172 (73.26%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLYSLAPV   F+  N++G S+   +    DKVLM+ W+ LK+ +LEGG+ FNK +GM  ++Y G D RFN VFN GMS+H++++M+K+LE Y+GF+             ATLNMI+SKYP IKGIN+DLPHVI++APSYPG++HVGGD+F SVP+ D IFMKW+ + + D
Sbjct:  103 ERLYSLAPVCK-FLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSD 273          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.457e-51
Identity = 91/172 (52.91%), Postives = 124/172 (72.09%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +R+Y L PV  Y  +N ++G S+        DKVLM+ W+ LK+ IL+GG+ FNK +GM  ++Y G D RFN VFNNGMS+H+++ M+K+LE+YKGFE             ATL MI+SKYP++KGIN+DLPHVI++APS+PGIEHVGGD+F SVP+ D IFMKW+ + + D
Sbjct:  101 ERIYGLGPVCKYLTKN-EDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSD 271          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.297e-50
Identity = 90/172 (52.33%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLY LAPV   F+  N++G S+ P      DKVLM+ W+ L + +++GG+ FNK +GM  ++Y G D RFN VFN GMS+H+++ M+K+LE+Y GF+             ATLNMI+SKYP IKGIN+DLPHVI++APSYPG+EHVGGD+F SVP+ D IFMKW+ + + D
Sbjct:  101 ERLYGLAPVCK-FLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSD 271          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.694e-50
Identity = 90/172 (52.33%), Postives = 120/172 (69.77%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLY L PV   F+  N+ G S+ P      DKVL++ W+ LK+ +LEGG+ FNK +GM  ++Y G D RFN VFN GM+ H+++ M+K+LE+YKGFE             A LNMI+SKYP IKGIN+DLPHVI++AP YPG+EHVGGD+F SVP+ D IFMKW+ + + D
Sbjct:  103 ERLYGLGPVCK-FLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSD 273          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.212e-50
Identity = 92/172 (53.49%), Postives = 122/172 (70.93%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLYSLAPV  +  +N  +G S+ P +    DKVLM+ W+ L + +L+GG+ FNK +GM  ++Y G D RFN VFN GMS HT++ M+K+LE Y GFE             AT+NMI+SKYP IKGIN+DLPHVI++APSYPG+E VGGD+F SVP+AD IFMKW+ + + D
Sbjct:   99 ERLYSLAPVCKFLTKNG-DGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSD 269          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 8.405e-50
Identity = 89/172 (51.74%), Postives = 122/172 (70.93%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            QRLY LA V+ Y V+N ++G S+        DKVLM+ W+ LK+ +L+GG+ FNK +GM  ++Y G D RFN VFN GMS H+++ M+K+LE+Y GFE             A +N I+SKYP IKGIN+DLPHVI++APSYPG+EHVGGD+F S+P+AD +FMKW+ + + D
Sbjct:  103 QRLYGLATVAKYLVKN-EDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSD 273          
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 8.405e-50
Identity = 90/172 (52.33%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    2 QRLYSLAPVSAYFVRNNQNGASLRPYMAWCLDKVLMDGWFLLKEQILEGGMAFNKVHGMDMYDYMGVDSRFNDVFNNGMSSHTSVVMEKVLESYKGFEHXXXXXXXXXXXXATLNMIISKYPHIKGINYDLPHVIKNAPSYPGIEHVGGDLFESVPEADTIFMKWVLNGFDD 517
            +RLY LAPV   F+  N +G S+ P +    DKVLM+ W+ LK+ +L+GG+ FNK +GM  ++Y G D RFN VFN GMS+H+++ M+K+LE Y+GFE             ATLNMIISKYP IKGIN++LPHV+++APS+ G+EHVGGD+F SVP+ D IFMKW+ + + D
Sbjct:   90 ERLYGLAPVCK-FLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSD 260          
The following BLAST results are available for this feature:
BLAST of BQ623933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
COMT2_OCIBA6.876e-5254.07Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_POPKI1.173e-5154.07Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM2.000e-5153.49Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO2.000e-5153.49Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
OMT1_ARATH4.457e-5152.91Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_OCIBA1.297e-5052.33Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_PRUDU1.694e-5052.33Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CAPCH2.212e-5053.49Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_MEDSA8.405e-5051.74Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_COFCA8.405e-5052.33Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_01024 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01024 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623933 ID=BQ623933; Name=BQ623933; organism=Citrus sinensis; type=EST; length=518bp
GCAAAGGCTCTACTCTCTTGCTCCTGTTTCAGCATACTTTGTTCGCAATA
ATCAAAACGGCGCGTCGTTGCGTCCCTACATGGCCTGGTGTCTCGACAAG
GTCCTCATGGATGGCTGGTTTCTGTTGAAAGAACAAATTCTTGAAGGAGG
AATGGCGTTTAATAAAGTGCACGGAATGGATATGTACGATTACATGGGCG
TTGACTCAAGATTCAATGATGTTTTCAACAATGGAATGTCAAGCCACACT
TCTGTCGTCATGGAGAAGGTCCTAGAATCATACAAAGGCTTTGAACATGT
TAAGAAGCTTGTTGATGTTGGCGGCGGCTTAGGAGCTACTCTTAACATGA
TAATTTCCAAATACCCTCATATTAAGGGTATTAATTATGATTTACCTCAT
GTTATTAAAAATGCCCCATCTTATCCTGGCATTGAACATGTAGGTGGAGA
CTTGTTTGAAAGTGTTCCTGAGGCAGATACTATTTTTATGAAGTGGGTCC
TTAATGGTTTTGATGATG
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