BQ624018

Overview
NameBQ624018
Unique NameBQ624018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ624018 vs. ExPASy Swiss-Prot
Match: ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 84/161 (52.17%), Postives = 108/161 (67.08%), Query Frame = 2
Query:   62 MPRGTLEVLLVGCKGLEDSDFLGSVDPYVVLTCRTQEQKSSIGSGSG--PEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATSVVFSLFIYI*KVVYTNKLSLISCGVSMTSYSISLEPLFMEGSLPPTAYNVVKNQEYCGEIRVGLTFTPERDGD 538
            M +GTLEVLLVG KGLE++D+L ++DPY VL CR+QEQKSS+ SG G  PEWNETF+F++T + TEL +K+MD D+ ++DD++GEAT                                ISLE ++ EGS+PPT YNVVK +EY GEI+VGLTFTPE D D
Sbjct:    1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHNATELIIKLMDSDSGTDDDFVGEAT--------------------------------ISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGLTFTPEDDRD 129          
BLAST of BQ624018 vs. ExPASy Swiss-Prot
Match: ERG3_ORYSI (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 84/161 (52.17%), Postives = 108/161 (67.08%), Query Frame = 2
Query:   62 MPRGTLEVLLVGCKGLEDSDFLGSVDPYVVLTCRTQEQKSSIGSGSG--PEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATSVVFSLFIYI*KVVYTNKLSLISCGVSMTSYSISLEPLFMEGSLPPTAYNVVKNQEYCGEIRVGLTFTPERDGD 538
            M +GTLEVLLVG KGLE++D+L ++DPY VL CR+QEQKSS+ SG G  PEWNETF+F++T + TEL +K+MD D+ ++DD++GEAT                                ISLE ++ EGS+PPT YNVVK +EY GEI+VGLTFTPE D D
Sbjct:    1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHNATELIIKLMDSDSGTDDDFVGEAT--------------------------------ISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGLTFTPEDDRD 129          
BLAST of BQ624018 vs. ExPASy Swiss-Prot
Match: Y1322_ARATH (C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana GN=At1g63220 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.204e-36
Identity = 81/159 (50.94%), Postives = 100/159 (62.89%), Query Frame = 2
Query:   62 MPRGTLEVLLVGCKGLEDSDFLGSVDPYVVLTCRTQEQKSSIGSGSG--PEWNETFVFTITGDVTELTLKIMDKDTFSNDDYLGEATSVVFSLFIYI*KVVYTNKLSLISCGVSMTSYSISLEPLFMEGSLPPTAYNVVKNQEYCGEIRVGLTFTPERD 532
            MP GTLEV+LV  KGLED+DFL ++DPYV LTCRTQ+QKS++  G G  PEWNETF+FT++   TEL  KI DKD  + DD +GEAT                                I LEP+F+EGS+PPTAYNVVK++EY GEI V L+F P  +
Sbjct:    1 MPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEAT--------------------------------IPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSEN 127          
BLAST of BQ624018 vs. ExPASy Swiss-Prot
Match: ERG1_ORYSJ (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica GN=ERG1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 64/159 (40.25%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   71 GTLEVLLVGCKGLEDSDFLGSV---DPYVVLTCRTQEQKSSIG--SGSGPEWNETFVFTITGDVT----ELTLKIMDKDTFSNDDYLGEATSVVFSLFIYI*KVVYTNKLSLISCGVSMTSYSISLEPLFMEGSLPPTAYNVVKNQEYCGEIRVGLTFT 520
            G LEV LV  KGL  +DFLG +   DPYVV+  R+QE+KSS+    G  P WNE F F I         +L L++MD DTFS DD+LGEAT                N   LIS G+   ++ +S     +          V+ ++ Y GEIRV LTFT
Sbjct:    5 GVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEAT---------------INVTDLISLGMEHGTWEMSESKHRV----------VLADKTYHGEIRVSLTFT 138          
BLAST of BQ624018 vs. ExPASy Swiss-Prot
Match: ERG1_ORYSI (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica GN=ERG1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 64/159 (40.25%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   71 GTLEVLLVGCKGLEDSDFLGSV---DPYVVLTCRTQEQKSSIG--SGSGPEWNETFVFTITGDVT----ELTLKIMDKDTFSNDDYLGEATSVVFSLFIYI*KVVYTNKLSLISCGVSMTSYSISLEPLFMEGSLPPTAYNVVKNQEYCGEIRVGLTFT 520
            G LEV LV  KGL  +DFLG +   DPYVV+  R+QE+KSS+    G  P WNE F F I         +L L++MD DTFS DD+LGEAT                N   LIS G+   ++ +S     +          V+ ++ Y GEIRV LTFT
Sbjct:    5 GVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEAT---------------INVTDLISLGMEHGTWEMSESKHRV----------VLADKTYHGEIRVSLTFT 138          
The following BLAST results are available for this feature:
BLAST of BQ624018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ERG3_ORYSJ3.386e-3952.17Elicitor-responsive protein 3 OS=Oryza sativa subs... [more]
ERG3_ORYSI3.386e-3952.17Elicitor-responsive protein 3 OS=Oryza sativa subs... [more]
Y1322_ARATH1.204e-3650.94C2 domain-containing protein At1g63220 OS=Arabidop... [more]
ERG1_ORYSJ2.523e-1840.25Elicitor-responsive protein 1 OS=Oryza sativa subs... [more]
ERG1_ORYSI2.523e-1840.25Elicitor-responsive protein 1 OS=Oryza sativa subs... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_01109 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_01109 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ624018 ID=BQ624018; Name=BQ624018; organism=Citrus sinensis; type=EST; length=715bp
AACATCAGACAGCTGACCACCAAATCAACCAAATTTCACCTGAACTGAAC
ATCACCGAAAGATGCCAAGAGGAACGCTTGAAGTCCTTCTTGTTGGCTGC
AAAGGCCTCGAGGATTCTGATTTCCTCGGTAGTGTAGATCCGTATGTCGT
TCTTACTTGCCGGACACAGGAGCAGAAAAGCAGTATCGGATCAGGATCTG
GACCTGAATGGAACGAGACCTTCGTGTTTACAATTACAGGTGATGTTACG
GAACTCACTTTGAAAATCATGGACAAGGATACATTTAGCAACGACGATTA
TCTTGGAGAAGCAACGTCAGTTGTATTTTCCCTTTTTATATATATATAGA
AAGTAGTGTACACGAACAAATTAAGCTTAATTAGTTGTGGTGTGAGTATG
ACTTCTTACAGCATTTCATTAGAGCCTTTGTTCATGGAAGGAAGCCTTCC
TCCAACTGCTTACAATGTTGTTAAGAACCAGGAGTACTGCGGGGAGATTA
GAGTTGGCCTTACTTTCACACCCGAGAGAGACGGCGACGGGGCATACTGA
GCTGAGGAGAACAGAGTTGTCGTCGTGGATGGGGAGAATCGTCTTGCATA
ATATGACAATTTGTTTTGGATTTTGATGTTTTTCTTTCACCAAAGAATCA
AGTGTTTGTTTGGAAATATTGGTTTCCTCTGCGTATTTGTGTTTAAAAAA
AAAAAAAAAAAACTG
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