CB250298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.000e-25 Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 3 Query: 3 SMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 167 SMTKAFCIAF+MTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF+ Sbjct: 120 SMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS 174
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.411e-25 Identity = 51/56 (91.07%), Postives = 56/56 (100.00%), Query Frame = 3 Query: 3 SMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNI 170 SMTKAFCIAF+MTFFSVFDVPVFWPILLCYW+VLFVLTMRRQIAHMIK++YIPF+I Sbjct: 119 SMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSI 174
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.138e-19 Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 3 Query: 3 SMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 167 S+ +AF I F+MTFF VFDVPVFWPILL YW++LF LTMR+QI HMIKYRY+PF+ Sbjct: 141 SIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFS 195
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_YEAST (Protein RER1 OS=Saccharomyces cerevisiae GN=RER1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 35/53 (66.04%), Postives = 45/53 (84.91%), Query Frame = 3 Query: 12 KAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNI 170 +A I+ +++ FS+FD+PVFWPILL Y+I+LF LTMRRQI HMIKYRYIP +I Sbjct: 126 RATVISLLLSLFSIFDIPVFWPILLMYFILLFFLTMRRQIQHMIKYRYIPLDI 178
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 9 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 164 TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 126 TKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 9 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 164 TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 126 TKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 9 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 164 TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 126 TKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_SACPS (Protein RER1 OS=Saccharomyces pastorianus GN=RER1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15 Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 3 Query: 12 KAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNI 170 +A I+ V++ FS+FD+PVFWPILL Y+++LF LTMRRQI HM+KYRYIP +I Sbjct: 126 RATVISLVLSLFSIFDIPVFWPILLMYFVLLFFLTMRRQIQHMMKYRYIPLDI 178
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 9 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 164 TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 126 TKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CB250298 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 9 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 164 TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 126 TKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177 The following BLAST results are available for this feature:
BLAST of CB250298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250298 ID=CB250298; Name=CB250298; organism=Citrus sinensis; type=EST; length=601bpback to top |