CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT23_ARATH (Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial OS=Arabidopsis thaliana GN=At3g08860 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.733e-80 Identity = 135/161 (83.85%), Postives = 151/161 (93.79%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 ARLYTGCNDI+SLRN+YHGNAA TMGATAQSNWKFNVVQ+GVHHA+NPDPYRG+FG+DGE YA DV DLI FGTSG VAGF+ ESIQGVGGI+ELAPGYLPA Y ++KAGG+CIADEVQ+GFARTG+HFWGF++HGV+PDIVTMAKGIGNGIPLGAVVTT Sbjct: 179 ARLYTGCNDIVSLRNSYHGNAAATMGATAQSNWKFNVVQSGVHHAINPDPYRGIFGSDGEKYASDVHDLIQFGTSGQVAGFIGESIQGVGGIVELAPGYLPAAYDIVRKAGGVCIADEVQSGFARTGTHFWGFQSHGVIPDIVTMAKGIGNGIPLGAVVTT 339
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT22_ARATH (Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial OS=Arabidopsis thaliana GN=AGT3 PE=2 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 2.051e-73 Identity = 128/161 (79.50%), Postives = 144/161 (89.44%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 A+LYTGC DI+++RN YHGNAA TMGAT QS WKFNVVQ VHHALNPDPYRGVFG+DGE YAKD+QDLI +GT+GH+AGF+ E+IQGVGGI+ELAPGYL A Y ++KKAGGL IADEVQ+GFARTG +FWGFEAH VVPDIVTMAKGIGNG PLGAVVTT Sbjct: 176 AKLYTGCQDIVAVRNGYHGNAAATMGATGQSMWKFNVVQNSVHHALNPDPYRGVFGSDGEKYAKDLQDLIQYGTTGHIAGFICEAIQGVGGIVELAPGYLSAAYDTVKKAGGLFIADEVQSGFARTG-NFWGFEAHNVVPDIVTMAKGIGNGFPLGAVVTT 335
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT21_ARATH (Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial OS=Arabidopsis thaliana GN=AGT2 PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 2.969e-64 Identity = 110/161 (68.32%), Postives = 136/161 (84.47%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 ARLYTG ++ISLRNAYHG ++ T+G TA + WK+ + Q +HH +NPDPYRGVFG+DG +YAKDV D I++GTSG VAGF++E+IQGVGG +ELAPGYL +VY+ ++ AGG+CIADEVQ GF RTGSH+WGF+ VVPDIVTMAKGIGNG+PLGAVVTT Sbjct: 174 ARLYTGSLEMISLRNAYHGGSSNTIGLTALNTWKYPLPQGEIHHVVNPDPYRGVFGSDGSLYAKDVHDHIEYGTSGKVAGFIAETIQGVGGAVELAPGYLKSVYEIVRNAGGVCIADEVQTGFGRTGSHYWGFQTQDVVPDIVTMAKGIGNGLPLGAVVTT 334
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT2_RAT (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Rattus norvegicus GN=Agxt2 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 4.182e-34 Identity = 77/184 (41.85%), Postives = 103/184 (55.98%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT-GVHHALNPDPYRGVFGA------------------DG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 AR Y+ DIIS R AYHG + T+G T +K V T + PD +RG +G DG E Y + +D ++ + +AGF +E IQGV G+++ +L + +++ GG+CIADEVQ GF R GSHFWGF+ H +PDIVTMAKGIGNG P+ AVVTT Sbjct: 179 ARAYSNHTDIISFRGAYHGCSPYTLGLTNVGIYKMKVPSTIACQSTMCPDVFRGPWGGSHCRDSPVQTVRKCSCAPDGCQAKERYIEQFKDTLNTSVATSIAGFFAEPIQGVNGVVQYPKEFLKEAFALVRERGGVCIADEVQTGFGRLGSHFWGFQTHDTMPDIVTMAKGIGNGFPMAAVVTT 362
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT2_HUMAN (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens GN=AGXT2 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.182e-34 Identity = 74/184 (40.22%), Postives = 103/184 (55.98%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ-TGVHHALNPDPYRGVFGADG----------------------EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 AR ++ DIIS R AYHG + T+G T +K + TG + PD +RG +G + Y + +D + + +AGF +E IQGV G+++ G+L ++ ++ GG+CIADEVQ GF R GSHFWGF+ H V+PDIVTMAKGIGNG P+ AV+TT Sbjct: 181 ARAHSNNIDIISFRGAYHGCSPYTLGLTNVGTYKMELPGGTGCQPTMCPDVFRGPWGGSHCRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIGNGFPMAAVITT 364
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT2_BOVIN (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Bos taurus GN=AGXT2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.217e-33 Identity = 73/184 (39.67%), Postives = 103/184 (55.98%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ-TGVHHALNPDPYRGVFGADG----------------------EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 AR ++ DIIS R AYHG + T+G T +K ++ G + PD + G +G + Y + +D + + +AGF +E IQGV G+++ G+L ++ +++ GG+CIADEVQ GF R GSHFWGF+ H V+PDIVTMAKGIGNG P+ AVVTT Sbjct: 181 ARAHSNSTDIISFRGAYHGCSPYTLGLTNVGIYKMDLPHGMGCQPTMCPDIFHGPWGGSHCRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPKGFLKEAFELVRERGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIGNGFPMAAVVTT 364
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT2_MOUSE (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Mus musculus GN=Agxt2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.540e-33 Identity = 75/184 (40.76%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ-TGVHHALNPDPYRGVFGA----------------------DGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 AR ++ DIIS R AYHG + T+G T +K V G + PD +RG +G E Y + +D ++ + +AGF +E IQGV G+++ +L + +++ GG+CIADEVQ GF R GSHFWGF+ H V+PDIVTMAKGIGNG P+ AVVTT Sbjct: 180 ARAHSNHTDIISFRGAYHGCSPYTLGLTNVGIYKMEVPGGIGCQSTMCPDVFRGPWGGIHCRDSPVQTVRDCSCAPDCCQAKERYIEQFKDTLNTSVATSIAGFFAEPIQGVNGVVQYPKEFLKEAFALVRERGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIGNGFPMAAVVTT 363
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT2_PONAB (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Pongo abelii GN=AGXT2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.757e-32 Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ-TGVHHALNPDPYRGVFGADG----------------------EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 AR ++ DIIS R AYHG + T+G T +K + TG + PD +RG +G + Y + +D + + +AGF +E IQGV G+++ G+L ++ ++ GG+CIADEVQ GF R GSHF GF+ H V+PDIVTMAKGIGNG P+ AVVTT Sbjct: 181 ARAHSNNIDIISFRGAYHGCSPYTLGLTNIGTYKMELPGGTGCQPTMCPDVFRGPWGGSHCRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFRGFQTHDVLPDIVTMAKGIGNGFPMAAVVTT 364
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AGT2L_DROME (Alanine--glyoxylate aminotransferase 2-like OS=Drosophila melanogaster GN=CG8745 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.644e-30 Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG-------VHHALNPDPYRGVF------GAD-GEMYAKDVQDLID--FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 AR +T D+I+L +AYHG+ M S +KFN Q G VH A PD Y G F AD G +YA+ ++++ VA F++ES+Q GG I GY AVY +++ AGG+CIADEVQ GF R GSH+W FE V+PDIV +AK +GNG P+GAVVTT Sbjct: 134 ARNFTKRQDVITLDHAYHGHLQSVMEV---SPYKFN--QPGGEAKPDYVHVAPCPDVYGGKFTDKMYPDADMGALYAQPIEEICQKQLAKGQGVAAFIAESLQSCGGQILPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRVGSHYWAFETQNVIPDIVCVAKPMGNGHPVGAVVTT 305
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L1_DANRE (Alanine--glyoxylate aminotransferase 2-like 1 OS=Danio rerio GN=agxt2l1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.392e-29 Identity = 75/171 (43.86%), Postives = 104/171 (60.82%), Query Frame = 2 Query: 11 YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG-----VHHALNPDPYRGVFGAD----GEMYAKDVQDLIDFG-TSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484 YTG DII+L NAYHG+ + + S +KF+ + VH AL+PD YRG + D YA++V+++I+ GH +A F++ES+Q GG + GY V + ++ AGG+ IADEVQ GF R G+HFWGF+ G VPDIVTM K IGNG P+ V+T+ Sbjct: 127 YTGHKDIITLDNAYHGHVSSLIDI---SPYKFHQMAGAEPSQHVHVALSPDTYRGKYREDHPDPATAYAENVKEVIEEAHKKGHEIAAFIAESLQSCGGQVIPPMGYFQKVAQHVRNAGGIFIADEVQVGFGRVGTHFWGFQLQGEDFVPDIVTMGKPIGNGHPMSCVITS 294 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |