CB250319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.478e-95 Identity = 163/210 (77.62%), Postives = 184/210 (87.62%), Query Frame = 2 Query: 2 QGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKNQPAEASCANADGSASGFILPNSCL 631 QGV+VS +G+SPNTDGIHVQ SSGVTIL+SKI TGDDCVS+GPG +NLWIE VACGPGHGISIGSLGKEQ+EAGVQNVTV +VTF+GTQNG+RIKSWGRPS GFARNILFQHA M NV+NPI+IDQ+YCPDN CPGQ SGV+ISDV Y+DIHGTSATEV VK DCS K+PC I LEDVKL YKNQ AE+SC++ADG+ G + P SCL Sbjct: 184 QGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCSHADGTTEGVVQPTSCL 393
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 4.625e-73 Identity = 131/210 (62.38%), Postives = 166/210 (79.05%), Query Frame = 2 Query: 5 GVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKNQPAEASCANADGSASGFILPNSCLK 634 GVKVSA +SPNTDGIHV++S V I +S+IGTGDDC+S+GPG+TN++I+ + CGPGHGISIGSLG+ ++E GV NVTV++V F GT NGVRIK+WG+ SN FARNI+FQH M V NPIIIDQ+YC + CP Q SGVK+S+V Y+DIHGTS TEV V LDCS + PCTGI ++DV L+ ++PA+ASC NA+GSA+ + CLK Sbjct: 191 GVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCL-HKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCLK 399
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 7.677e-52 Identity = 104/209 (49.76%), Postives = 135/209 (64.59%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIY--KNQPAEASCANADGSASGFILPNSC 628 + + A +S NTDGIH+ S+GV ++ +KI TGDDCVS+G G NL +ENV CGPGHGISIGSLG+ E V+ VTV T NGVRIK+W G A NILF+ M+NV P++IDQ YCP + G S VK+SDV + I GTSAT+V VKL CS PCT I+L D+ L++ K PA ++C+N SG ++P +C Sbjct: 228 IGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 436
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.710e-51 Identity = 99/204 (48.53%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKNQP--AEASCANADGSASGFILP 619 V++ DSPNTDGIHV + + I DS + TGDDC+S+ G+ N+ + CGPGHGISIGSLG++ EA V NV V T GT NGVRIK+W + +G A+NI+FQ +M NV NPIII+Q+YC CP Q S V++S+V+Y++I GTS+ + VK CS PC GIS+++VKL+ + Q ++ASC+N G + P Sbjct: 234 VTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTW-QGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKLDTRGNVSP 436
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50 Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKNQPAEASCANADGSASGFILP 619 V+++A GDSPNTDGIH+ + + + +S IGTGDDC+S+ G NL I ++ CGPGHGISIGSLG + +A V + V F+ + NGVRIK++ + +G A+NI FQ+ M NV NPIIIDQ+YC D + C Q S V++ +V+Y++I GTSAT+V + L+CS K PC GI LE+VK+ + ASC NA+ G + P Sbjct: 231 VEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTY-QGGSGTAKNIKFQNIRMENVKNPIIIDQDYC-DKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKI----KGGTASCKNANVKNQGTVSP 428
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.502e-50 Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 2 Query: 2 QGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQA-SGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKNQ--PAEASCANADGSASGFILP 619 Q V V+A G S NTDGIHV S GVTI ++KI TGDDC+S+GPG+ N+ I V CGPGHGISIGSLG+ E V+ +TV TF+GT NGVR+K+W G A ++ FQ MNNV NP+I+DQ YCP C QA S +K+S++ + +I GTS +V V + CS PC+ + + ++ L Y+ PA ++C+N + SG +P Sbjct: 165 QHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCP-YGQCSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSGKQVP 372
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.091e-49 Identity = 98/208 (47.12%), Postives = 131/208 (62.98%), Query Frame = 2 Query: 11 KVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIY--KNQPAEASCANADGSASGFILPNSC 628 K+SAA S NTDGIH+ S GV I++++I TGDDC+S+G G+ N+ I N+ CGPGHGIS+GSLG+ + E V + V + T TG+QNGVRIK+W + G A + FQ MN+V PI+IDQ YCP N S VK+S + +++I GTS T+ VKL CS PC G+ L D+ L Y K PA + C N + G +P C Sbjct: 147 KISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAIC 354
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.731e-49 Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKL-IYKNQPAEASCANADGSASGFILPN 622 V+A +SPNTDGIHV + + I IGTGDDC+S+ G+ + + ++ CGPGHGISIGSLG EA V +V V GT NGVRIK+W + +G A NI FQ+ M+NV+NPIIIDQNYC + C Q+S V++ +V+YQ+I GT A+ V + DCS + PC GI LEDV L I A+A C N + S +G + P+ Sbjct: 252 VTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTW-QGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVELSETGVVSPH 454
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.355e-48 Identity = 95/204 (46.57%), Postives = 135/204 (66.18%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKN-QPAEASCANADGSASGFILPN 622 ++A+ SPNTDG+HV + + I D+ IGTGDDC+S+ G+ N+ N+ CGPGHGISIGSLG EA V NVTV G +NGVRIK+W + +G A NI F + M +V PIIIDQNYC C Q S V++ +V+Y++I GTSAT+V +K DCS+ PC GI +E++ L+ ++ +P+EA+C N + + + P+ Sbjct: 239 INASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTW-QGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINLVGESGKPSEATCKNVHFNNAEHVTPH 441
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48 Identity = 96/204 (47.06%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKLIYKNQPAEASCANADGSASGFILP 619 V V+A DSPNTDGIH+ + + + +S IGTGDDC+S+ G+ N+ I ++ CGPGHGISIGSLG + +A V VTV +GT NGVRIK++ + +G A NI+FQ+ M+NV NPIIIDQ+YC D + C + S V++ +V+Y+DI GTSA+E + +CS PC GI L+ V + + +A+C NA+ G +LP Sbjct: 231 VVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPIIIDQDYC-DKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI----KGGKATCTNANVVDKGAVLP 428 The following BLAST results are available for this feature:
BLAST of CB250319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250319 ID=CB250319; Name=CB250319; organism=Citrus sinensis; type=EST; length=708bpback to top |