CB250328

Overview
NameCB250328
Unique NameCB250328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig116 contig Csv1_Contig116:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 97/161 (60.25%), Postives = 128/161 (79.50%), Query Frame = 1
Query:  124 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC 606
            +E T DLSQLF+G +FA GAHSR+Y GIYK   VAVK++RIP     E   A+LE+QF  EVALLSRL +PN+++F+AACKKPPVYC+ITEY+S+G+LR YL+K E  +L +  ++ +ALDI+RGMEY+HSQGVIHRDLK  N+L++ E  +K+ADFG +C
Sbjct:   77 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPT--HKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSC 235          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.448e-26
Identity = 60/156 (38.46%), Postives = 96/156 (61.54%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            +  S+L +  +   G    +Y G+++   VA+K I+I +D  N+ L     ++F +E+ +LSRL +PN++  +AAC  PP  C ITEYL  GSL   LH  + K + +     +A+ IA+GM Y+H  GVIHRD+K  N+L+D+  ++KI DFG++
Sbjct:  657 ISFSELKISSKLGEGTFGVVYKGLWRGSSVAIKQIKINEDVNNQVL-----EEFRKELTILSRLRHPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHSKKIK-MNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKICDFGLS 806          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.083e-25
Identity = 59/162 (36.42%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  124 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIA 603
            D   +D+ Q+ +G+R   G +  +Y G ++   VAVK  ++P  + NE +     K+F+RE+ L+  L +PNVI+F+ +C  PP  C+ TEY+  GSL + LH  +   L    LI + +D A+G+ Y+H+    ++HRDLK  N+L+D+ + +K+ADFG++
Sbjct:  365 DGKDIDIHQIKIGVRIGKGNYGEVYLGTWRGSQVAVK--KLPAHNINENIL----KEFHREINLMKNLRHPNVIQFLGSCLIPPDICICTEYMPRGSLYSILHD-QALQLQWSLLIKMMIDAAKGVIYLHNSTPVILHRDLKSHNLLVDENWKVKVADFGLS 519          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.019e-24
Identity = 60/170 (35.29%), Postives = 99/170 (58.24%), Query Frame = 1
Query:  100 RVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++  V+   E  V LS++ +G R   G + +++ G ++   VAVK++       N+ +  +L     +EV LL +L +PN++ F+ AC +P   C++TEYLS GSL   L   E   +     + +  D ARGM Y+HS+   +IHRDLK +N+L+D  + +K+ADFG+A
Sbjct:  834 KIIEVEKPFEWEVPLSEIAIGARIGRGGYGQVFRGSWRGTEVAVKMLF------NDNVNLKLISDLRKEVDLLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLD-ESIEMDWGLRLQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSWQVKVADFGLA 996          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24
Identity = 56/160 (35.00%), Postives = 97/160 (60.62%), Query Frame = 1
Query:  121 ADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 600
            +D+  +D  +L LG +   GA   ++ G ++   VAVK+I  PD    +T+   +E+ F  EV +++ L +PNV+ F+AA  KPP  C++ E+++ GSL   L       +P    + IA   ++GM ++HS G+ HRDLK  N+L+D ++++K++DFG+
Sbjct:  776 SDDWEIDFHELELGEQLGTGAFGEVHKGTWRGTEVAVKMIS-PD----KTITKDIERNFKDEVRVMTTLRHPNVVLFMAASTKPPKMCIVMEFMALGSLHDLLKNELIPDIPFALKVKIAYQASKGMHFLHSSGITHRDLKSLNLLLDIKWNVKVSDFGL 930          

HSP 2 Score: 108.227 bits (269), Expect = 3.338e-23
Identity = 59/158 (37.34%), Postives = 95/158 (60.13%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS--QGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++  ++ +G +   G++  +Y G +K+  VA+K       DEN  L  R       E+A L +LH+PN+I  V A  K P  C++TEY+++G+LR  +     K L   + I I ++IA+G+ Y+HS    +IHRD+KP N+LID+ +++KIADFG A
Sbjct: 1394 INYDEIKMGEQIGLGSYGVVYRGKWKNVDVAIKKFIKQKIDENHLLGIR------EEIAFLKKLHHPNIITMVGASLKKPNICIVTEYMAKGNLRDAMRTCTPK-LEWHQKIKILVNIAKGISYLHSFDPPIIHRDIKPSNILIDENWNVKIADFGFA 1544          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: YR831_MIMIV (Putative serine/threonine-protein kinase/receptor R831 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R831 PE=4 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 7.436e-23
Identity = 53/155 (34.19%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 600
            +D S+L +G     G +  +Y  I+K   VAVK+I       ++ ++  +E+ F  EV +++ L +PNV+ F+AA  K P  C++ E++S GSL   L       +P    I +A   ++GM ++HS G++HRDLK  N+L+D ++++K++DFG+
Sbjct:  781 IDFSELEIGETLGTGGYGEVYKSIWKGTEVAVKLI------SSKHVSKDMERSFFEEVKIMTSLRHPNVVLFMAASTKSPNMCIVMEFMSLGSLYDLLGNELIPEIPYALKIKMAYQASKGMHFLHSSGIVHRDLKSLNLLLDSKWNVKVSDFGL 929          

HSP 2 Score: 98.5969 bits (244), Expect = 2.645e-20
Identity = 52/158 (32.91%), Postives = 90/158 (56.96%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++  ++ +G +   G++  +++G +K   VAVK        E + L      +F  E+A LS L + N++ F+ AC K P  C++TEY+  G+LR  L   + K +     + +    A G++Y+HS    ++HRD+KP N+L+D+ F++KIADFG A
Sbjct: 1359 INYDEISIGKQIGLGSYGIVFNGKWKGVDVAVKKFVKQKLSETQLL------EFRAEMAFLSELKHSNIVTFIGACIKKPNICIVTEYMRMGNLRDVLKNPDIK-ITFANKLKLLYGAAMGIDYLHSSNPMIVHRDIKPANILVDEHFNVKIADFGFA 1509          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.164e-22
Identity = 56/162 (34.57%), Postives = 95/162 (58.64%), Query Frame = 1
Query:  124 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIA 603
            D   +D  Q+ +G+R   G    +Y G ++   VAVK  ++P  + NE +     K+F+RE+ L+  L +PNVI+F+ +C   P  C+ TEY+  GSL + LH  E   +    +  + +D A+G+ Y+H     ++HRDLK  N+L+D+ + +K+ADFG++
Sbjct:  382 DGKDIDTQQIKIGVRIGKGNFGEVYLGTWRGSQVAVK--KLPAHNINENIL----KEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMPRGSLYSILHN-EKIKISWSLVKRMMIDAAKGIIYLHGSTPVILHRDLKSHNLLVDENWKVKVADFGLS 536          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.820e-22
Identity = 52/158 (32.91%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH--SQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            +D+S++ +  R   G+ + ++ G ++   VA+K  ++ ++D+ + L      +  +E  ++S+L +PN+ +F+  C  PP   ++ EY+  GSL   LH     +L  P++ ++ALDIA+GM Y+H     VIHRDLK  N+L+D+ + +KI+DFG++
Sbjct:  486 IDISEIVVQNRIGRGSCAEVFTGTWRGIIVAIKKAKLLNEDDEDFL-----NELAQEATIMSQLRHPNICQFLGTCNNPPEILIVMEYMPLGSLYRILHD-PSISLDWPRMKSMALDIAKGMNYLHCCDPIVIHRDLKSHNLLVDEHYRVKISDFGLS 637          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21
Identity = 55/165 (33.33%), Postives = 99/165 (60.00%), Query Frame = 1
Query:  127 EHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT----LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE 609
            E+ +D++ +    +   GA S ++ G +K   VA+K ++I  D+E      + +++F REV  L + ++ N++ F+ AC KP   C+ITEY++ GSL   LH     T       P ++ +A D+A G+ ++HS  ++HRDL  +N+L+D+  ++KI+DFG++ E
Sbjct:  845 EYIIDINDIQFIQKVGEGAFSEVWEGWWKGIHVAIKKLKIIGDEE------QFKERFIREVQNLKKGNHQNIVMFIGACYKPA--CIITEYMAGGSLYNILHNPNSSTPKVKYSFPLVLKMATDMALGLLHLHSITIVHRDLTSQNILLDELGNIKISDFGLSRE 1001          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: KINX_DICDI (Probable serine/threonine-protein kinase kinX OS=Dictyostelium discoideum GN=kinX PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.960e-21
Identity = 53/144 (36.81%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  178 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA--IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            G   +++ G Y   PVA+K I I  DD N      LEK  NRE+  +    +PNVI+FV   +   +  ++TE +  G L+ YL   +++++ LP  +   IALD++  M Y+HS+ ++HRDLK  N+L+D+ + +K+ DFG A
Sbjct:   31 GGFGKVFKGEYLGAPVAIKKIHILPDDPNRV---DLEKFLNREIETIKLFTHPNVIQFVGISENNGILFIVTELIEGGDLQYYL---KNQSIDLPWFLRANIALDVSLAMSYLHSKSIVHRDLKSTNLLVDKNWKIKVCDFGFA 168          
The following BLAST results are available for this feature:
BLAST of CB250328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH9.007e-5360.25Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y9955_DICDI1.448e-2638.46Probable serine/threonine-protein kinase DDB_G0267... [more]
DRKA_DICDI6.083e-2536.42Probable serine/threonine-protein kinase drkA OS=D... [more]
DRKD_DICDI3.019e-2435.29Probable serine/threonine-protein kinase drkD OS=D... [more]
YR826_MIMIV3.943e-2435.00Putative serine/threonine-protein kinase/receptor ... [more]
YR831_MIMIV7.436e-2334.19Putative serine/threonine-protein kinase/receptor ... [more]
DRKB_DICDI2.164e-2234.57Probable serine/threonine-protein kinase drkB OS=D... [more]
DRKC_DICDI4.820e-2232.91Probable serine/threonine-protein kinase drkC OS=D... [more]
PYK2_DICDI4.081e-2133.33Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
KINX_DICDI6.960e-2136.81Probable serine/threonine-protein kinase kinX OS=D... [more]

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Properties
Property NameValue
Genbank descriptionEST0116 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ168 similar to protein kinase (acc# CAC09580), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250328 ID=CB250328; Name=CB250328; organism=Citrus sinensis; type=EST; length=609bp
ACAAGCCCTCTCAGGCACTTGGGTTCTTTGAGAGTTACCGAGAGATATAA
GAGCAGAAAGGAATCAGCTTGGACCAAGTATTTTGATCATGGCGGAGTTA
GGGTTAATGCTGTGGATGCTGCAGATGAACACACTGTTGACCTCTCTCAG
CTCTTTCTTGGGCTTAGGTTTGCTCACGGGGCACATAGCCGACTTTACCA
TGGGATATATAAGGACGAGCCTGTTGCGGTGAAGATTATCAGGATACCAG
ATGATGACGAAAATGAAACCTTGGCAGCTCGATTAGAGAAACAATTCAAT
CGAGAAGTAGCTCTTTTATCTCGCCTCCACAATCCAAATGTCATAAAGTT
TGTAGCAGCATGTAAAAAGCCACCAGTATATTGTGTCATCACAGAATATC
TATCAGAGGGTTCCTTGAGGGCATACTTGCATAAGCTGGAGCACAAAACC
CTCCCCTTACCGAAACTGATTGCAATTGCTCTCGATATTGCACGTGGAAT
GGAATACATTCACTCTCAAGGTGTCATTCATCGGGATCTTAAGCCAGAAA
ATGTCCTTATTGATCAAGAATTCCACCTGAAAATTGCTGATTTTGGCATA
GCCTGTGAG
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