CB290213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290213 vs. ExPASy Swiss-Prot
Match: ALKB_ECOLI (Alpha-ketoglutarate-dependent dioxygenase alkB OS=Escherichia coli (strain K12) GN=alkB PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14 Identity = 54/161 (33.54%), Postives = 75/161 (46.58%), Query Frame = -3 Query: 217 YGNIRPTDGDVPPIIPAEFHQLVGKAIQDSRALIEKIFPGRKDIEAELPCMSPDICIANFYSATGKLGLPQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 699 Y I P P +P FH L +A A P PD C+ N Y+ KL L QDKDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG++ + P ++ R NLTFRQ Sbjct: 78 YSPIDPQTNKPWPAMPQSFHNLCQRAAT----------------AAGYPDFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTI-------DCRYNLTFRQ 211
BLAST of CB290213 vs. ExPASy Swiss-Prot
Match: ALKB_SALTY (Alpha-ketoglutarate-dependent dioxygenase alkB OS=Salmonella typhimurium GN=alkB PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.689e-13 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = -3 Query: 217 IEAELPCMSPDICIANFYSATGKLGLPQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 570 I A PD C+ N Y+ KL L QDKDE D P+VS S+G A F +G LR ++++LE GD++++GG+SR +HG++ + P + R NLTFRQ Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLRRSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT-------GEFRYNLTFRQ 211
BLAST of CB290213 vs. ExPASy Swiss-Prot
Match: ALKB_CAUCR (Alpha-ketoglutarate-dependent dioxygenase alkB homolog OS=Caulobacter crescentus GN=alkB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = -3 Query: 217 PCMSPDICIANFYSATGKLGLPQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 555 P PD C+ N Y ++GL QD+DE+ D PV+S S+GD+A F G + + + L SGDV G +R FHGV++I P ++ SL+ GR+NLT R+ Sbjct: 114 PETPPDSCLVNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSS--SLVP----GGGRINLTLRR 216
BLAST of CB290213 vs. ExPASy Swiss-Prot
Match: ALKB_CAUCN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=alkB PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = -3 Query: 217 PCMSPDICIANFYSATGKLGLPQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTAPKSLLEETSMRRGRLNLTFRQ 555 P PD C+ N Y ++GL QD+DE+ D PV+S S+GD+A F G + + + L SGDV G +R FHGV++I P ++ SL+ GR+NLT R+ Sbjct: 114 PETPPDSCLVNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSS--SLVP----GGGRINLTLRR 216 The following BLAST results are available for this feature:
BLAST of CB290213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290213 ID=CB290213; Name=CB290213; organism=Citrus sinensis; type=EST; length=806bpback to top |