CB290235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH1_HEVBR (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Hevea brasiliensis GN=HMGR1 PE=2 SV=1) HSP 1 Score: 491.115 bits (1263), Expect = 3.332e-138 Identity = 250/287 (87.11%), Postives = 264/287 (91.99%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIY SGGA S+LL+DGMTRAP+VRFASA RA+ELKFFLEDP+NF+TLAVVFN+SSRFARLQ I+CSIAGKNLYIRF C+TGDAMGMNMVSKGVQNVL+FLQ+DF DMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA IKEEVV KVLKTNVA+LVELN LKN FNAHA NIVSAIFIATGQDPAQNVESSHCITMMEA+NDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA+KESPGSNSRLLA IVAGSVLAGELSLM Sbjct: 262 NRGCKAIYLSGGATSVLLKDGMTRAPVVRFASATRAAELKFFLEDPDNFDTLAVVFNKSSRFARLQGIKCSIAGKNLYIRFSCSTGDAMGMNMVSKGVQNVLEFLQSDFSDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTNVASLVELNMLKNLAGSAVAGALGGFNAHAGNIVSAIFIATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANKESPGSNSRLLAAIVAGSVLAGELSLM 548
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH3_SOLTU (3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Solanum tuberosum GN=HMG3 PE=2 SV=1) HSP 1 Score: 480.715 bits (1236), Expect = 4.503e-135 Identity = 237/287 (82.58%), Postives = 263/287 (91.64%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIY SGGA S+L RD MTRAP+VRF SA RA+ELKFF+EDP NFETL+VVFN+SSRFARLQ+IQC+IAGKNLY+RF C+TGDAMGMNMVSKGVQNVLD+LQN++PDMD+IGISGN+CSDKKPAAVNWIEGRGKSVVCEA IKE+VV KVLKT VATLVELN LKN FNAHA+NIVSA+++ATGQDPAQN+ESSHCITMMEA+NDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA++E+PGSN+RLLATIVAGSVLAGELSLM Sbjct: 264 NRGCKAIYVSGGATSVLFRDAMTRAPVVRFGSAKRAAELKFFVEDPMNFETLSVVFNKSSRFARLQNIQCAIAGKNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDIIGISGNYCSDKKPAAVNWIEGRGKSVVCEAIIKEDVVKKVLKTEVATLVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYLATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATIVAGSVLAGELSLM 550
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH3_HEVBR (3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Hevea brasiliensis GN=HMGR3 PE=2 SV=1) HSP 1 Score: 478.404 bits (1230), Expect = 2.235e-134 Identity = 235/287 (81.88%), Postives = 264/287 (91.99%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIYASGGA S+LLRDGMTRAP+VRF +A RA++LKFF+EDP+NF+T+AVVFN+SSRFARLQ +QC+IAGKNLY+RF C+TGDAMGMNMVSK VQNV+D+LQNDFPDMDVIG++GNFC+DKK AAVNWIEGRGKSVVCEA IKEEVV KVLKTNVA LVELN +KN FNAHA+N+V+A++IATGQDPAQNVESSHCITMMEA+NDGKDLHISV+MPSIE+GTVGGGTQLASQSACLNLLGVKGASK+SPGSNSRLLATIVAGSVLAGELSLM Sbjct: 273 NRGCKAIYASGGATSVLLRDGMTRAPVVRFPTAKRAADLKFFMEDPDNFDTIAVVFNKSSRFARLQSVQCAIAGKNLYMRFSCSTGDAMGMNMVSKAVQNVIDYLQNDFPDMDVIGLTGNFCADKKAAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTNVAALVELNMIKNLTGSAVAGSLGGFNAHASNMVTAVYIATGQDPAQNVESSHCITMMEAVNDGKDLHISVSMPSIELGTVGGGTQLASQSACLNLLGVKGASKDSPGSNSRLLATIVAGSVLAGELSLM 559
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_CAMAC (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Camptotheca acuminata PE=3 SV=1) HSP 1 Score: 478.019 bits (1229), Expect = 2.919e-134 Identity = 238/287 (82.93%), Postives = 262/287 (91.29%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAI+A GGA S+LLRD MTRAP+VRF SA RA++LKFFLE+P NFETLA VFN SSRF +LQ+I+C+IAGKNLY+R+ C+TGDAMGMNM+SKGVQNVLDFLQ+DFPDMDVIGISGN+CSDKKPAAVNWIEGRGKSVVCEA IKEEVV KVLKTNVA+LVELN LKN FNAHA+NIVSA+++ATGQDPAQNVESSHCITMMEAINDGKDLH+SVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKE+PGSN+RLLATIVAGSVLAGELSLM Sbjct: 280 NRGCKAIFACGGATSVLLRDAMTRAPVVRFGSAKRAADLKFFLENPLNFETLAAVFNSSSRFGKLQNIKCAIAGKNLYMRYSCSTGDAMGMNMISKGVQNVLDFLQDDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTNVASLVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYLATGQDPAQNVESSHCITMMEAINDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKEAPGSNARLLATIVAGSVLAGELSLM 566
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_NICSY (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Nicotiana sylvestris GN=HMGR PE=2 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 4.979e-134 Identity = 239/287 (83.28%), Postives = 259/287 (90.24%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIYASGGA S+LLRDGMTRAP VRF +A RA+ELKFF+EDP FETLA VFN+SSRFARLQ IQC+IAGKNLY+RF C+TGDAMGMNMVSKGVQNVLD+LQN++PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA I EEVV KVLKT VA LVELN LKN FNAHA+NIVSA++IATGQDPAQN+ESSHCITMMEA+NDGKDLH+SVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA++E PGSN+RLLATIVAGSVLAGELSLM Sbjct: 291 NRGCKAIYASGGATSVLLRDGMTRAPCVRFGTAKRAAELKFFVEDPVKFETLAAVFNQSSRFARLQRIQCAIAGKNLYMRFVCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYIATGQDPAQNIESSHCITMMEAVNDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREVPGSNARLLATIVAGSVLAGELSLM 577
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH2_SOLLC (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Solanum lycopersicum GN=HMG2 PE=3 SV=1) HSP 1 Score: 476.478 bits (1225), Expect = 8.493e-134 Identity = 238/287 (82.93%), Postives = 259/287 (90.24%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIYASGGA +LLRDGMTRAP VRF +A RA+ELKFF+EDP FE+LA VFN+SSRFARLQ IQC+IAGKNLY+R CC+TGDAMGMNMVSKGVQNVLD+LQN++PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA I EEVV KVLKT VA LVELN LKN FNAHA+NIVSA+FIATGQDPAQN+ESSHCITMMEA+NDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA++E+PGSN+RLLAT+VAGSVLAGELSLM Sbjct: 289 NRGCKAIYASGGATCILLRDGMTRAPCVRFGTAKRAAELKFFVEDPIKFESLANVFNQSSRFARLQRIQCAIAGKNLYMRLCCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVFIATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATVVAGSVLAGELSLM 575
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH2_SOLTU (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Solanum tuberosum GN=HMG2 PE=2 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 5.505e-133 Identity = 237/287 (82.58%), Postives = 258/287 (89.90%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIYASGGA ++LRDGMTRAP VRF +A RA+ELKFF+EDP FETLA VFN+SSRF RLQ IQC+IAGKNLY+RF C+TGDAMGMNMVSKGVQNVLD+LQN++PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA I EEVV KVLKT VA LVELN LKN FNAHA+NIVSA+FIATGQDPAQN+ESSHCITMMEA+NDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA++E+PGSN+RLLAT+VAGSVLAGELSLM Sbjct: 286 NRGCKAIYASGGATCIVLRDGMTRAPCVRFGTAKRAAELKFFVEDPIKFETLANVFNQSSRFGRLQRIQCAIAGKNLYMRFVCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVFIATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATVVAGSVLAGELSLM 572
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH1_SOLTU (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Solanum tuberosum GN=HMG1 PE=2 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 5.505e-133 Identity = 235/287 (81.88%), Postives = 262/287 (91.29%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAI+ SGGA S+LLRDGMTRAP+VRF +A RA+ELKFF+EDP NFETL+++FN+SSRFARLQ IQC+IAGKNLYI F C+TGDAMGMNMVSKGVQNVLD+LQ+++PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA IKEEVV KVLKT VA LVELN LKN FNAHA+NIVSA+++ATGQDPAQNVESSHCITMMEA+NDGKDLH+SVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA++++PGSN+RLLATIVAGSVLAGELSLM Sbjct: 286 NRGCKAIFVSGGADSVLLRDGMTRAPVVRFTTAKRAAELKFFVEDPLNFETLSLMFNKSSRFARLQGIQCAIAGKNLYITFSCSTGDAMGMNMVSKGVQNVLDYLQSEYPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTEVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYLATGQDPAQNVESSHCITMMEAVNDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANRDAPGSNARLLATIVAGSVLAGELSLM 572
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH2_CAPAN (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Capsicum annuum GN=HMGR2 PE=2 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 1.226e-132 Identity = 238/287 (82.93%), Postives = 259/287 (90.24%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAIYASGGA S+LLRDGMTRAP VRF +A RA+ELKFF+EDP NFETLA VFN+SSRFARLQ IQC+IAGKNL++RF C+TGDAMGMNMVSKGVQNVLD+LQN++ DMDVIGIS NFCSDKKPAAVNWIEGRGKSVVCEA I EEVV KVLKT VA LVELN LKN FNAHA+NIVSA++IATGQDPAQN+ESSHCITMMEA+NDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGA++E+PGSN+RLLATIVAGSVLAGELSLM Sbjct: 291 NRGCKAIYASGGATSILLRDGMTRAPCVRFGTAKRAAELKFFVEDPINFETLANVFNQSSRFARLQRIQCAIAGKNLHMRFVCSTGDAMGMNMVSKGVQNVLDYLQNEYADMDVIGISANFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSALAGALGGFNAHASNIVSAVYIATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATIVAGSVLAGELSLM 577
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_CATRO (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Catharanthus roseus GN=HMGR PE=2 SV=1) HSP 1 Score: 471.47 bits (1212), Expect = 2.732e-132 Identity = 235/287 (81.88%), Postives = 259/287 (90.24%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGCKAI ASGGA S+LLRDGMTRAP+VRF +A RA+ELKF++ED NFET++VVFN+SSRFA+LQ +QC+IAGKNLYIRF C+TGDAMGMNMVSKGVQNVL+FLQ D+PDMDV+GISGNFC+DKKPAAVNWIEGRGKSVVCEA IKEE+V VLKT VA L+ELN +KN FNAHA+NIVSAIFIATGQDPAQNVESS CITMMEA+NDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASK+SPG+NSRLLATIVAGSVLAGELSLM Sbjct: 281 NRGCKAILASGGANSVLLRDGMTRAPVVRFGTAKRAAELKFYMEDTQNFETISVVFNKSSRFAKLQSVQCAIAGKNLYIRFSCSTGDAMGMNMVSKGVQNVLEFLQTDYPDMDVLGISGNFCADKKPAAVNWIEGRGKSVVCEAIIKEEIVKTVLKTEVAALIELNMVKNLAGSAIAGALGGFNAHASNIVSAIFIATGQDPAQNVESSQCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKDSPGANSRLLATIVAGSVLAGELSLM 567 The following BLAST results are available for this feature:
BLAST of CB290235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290235 ID=CB290235; Name=CB290235; organism=Citrus sinensis; type=EST; length=862bpback to top |