CB290256
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.322e-24 Identity = 56/161 (34.78%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 327 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 L+ V ++V LPL VS N V+GV + VWWG+ E++ +Y+WS Y ++ ++V++ GLKL + FH IP+P WV IGES IFYT++SG + K L++ VD+ P+ G+T I+VY ++ +SF+ + F+ Sbjct: 10 LNYVPVYVMLPLGVVSVNNVFEDPEGLKEQLVQLREAGVDGVMVDVWWGIIEQKGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQWVLDIGESDPDIFYTNRSGTRDKEYLTIGVDNKPIFHGRTAIEVYSDYMKSFRENMSDFL 170
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23 Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 327 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 L+ V ++V LPL ++ N V+GV + VWWG+ E++ +Y+WS Y ++ ++V++ GLKL + FH IP+P WV IGES IFYT++SG + K L++ VD+ P+ G+T I++Y ++ +SF+ + F+ Sbjct: 10 LNYVPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMVDVWWGIIEQKGPKEYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVTIPIPQWVLDIGESDPDIFYTNRSGTRDKEYLTVGVDNKPIFHGRTAIEIYSDYMKSFRENMSEFL 170
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.352e-23 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 3 Query: 327 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 L+ V ++V LPL ++ N V+GV + VWWG+ E++ +Y+WS Y ++ ++V+K GLKL + FH IPLP WV IGES IFYT++SG + + LS+ VD+ P+ G+T I++Y ++ +SF+ + + Sbjct: 10 LNYVPVYVMLPLGVINVNNVFEDPDGLKEQLVQLRAAGVDGVMIDVWWGIIEQKGPKEYDWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVNIPLPKWVLDIGESDPDIFYTNRSGIRNQEYLSIGVDNKPIFHGRTAIEIYSDYMKSFRENMSDLL 170
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.469e-22 Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 336 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 V+++V LPLD VS N V+GV + VWWG+ E + Y+WS Y V ++V + GLKL + FH IP+P WV +G + IFYT++ G + L+L VDD P+ G+T +Q+Y ++ SF+ + K F+ Sbjct: 10 VQVYVMLPLDVVSVDNKFEKGDEIRAQLKKLTEAGVDGVMIDVWWGLVEGKGPKAYDWSAYKQVFDLVHEAGLKLQAIMSFHQCGGNVGDVVNIPIPQWVRDVGATDPDIFYTNRGGTRNIEYLTLGVDDQPLFHGRTAVQMYADYMASFRENMKKFL 167
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.469e-22 Identity = 54/158 (34.18%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 336 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 V+++V LPLD ++ NT +GV + VWWG+ E + G Y+WS Y V ++V++ GLKL + H IP+P WV +G+S IFYT++SG L+L VDD P+ G+T IQ+Y ++ +SF+ + F+ Sbjct: 10 VQVYVMLPLDVITVDNTFEKEDETRAQLKKLTEAGADGVMIDVWWGLVEGKEPGVYDWSAYRQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDVGKSNPDIFYTNRSGLTNIEYLTLGVDDQPLFHGRTAIQLYADYMKSFRENMADFL 167
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21 Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 336 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 V+++V LPLD VS N V+GV + VWWG+ E + Y+WS Y + E+V+K GLKL + FH IP+P WV +G IFYTD G + L+L VD+ P+ G++ +Q+Y ++ SF+ + K F+ Sbjct: 10 VQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFL 167
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.009e-21 Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 336 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 V+++V LPLD VS N V+GV + VWWG+ E + Y+WS Y + E+V+K GLKL + FH IP+P WV +G IFYTD G + L+L VD+ P+ G++ +Q+Y ++ SF+ + K F+ Sbjct: 10 VQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKEFL 167
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21 Identity = 52/161 (32.30%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 327 LDAVRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHALKQP-----KIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 L+ V ++V LPL V+ N V+GV + VWWG+ E + +Y+W Y ++ ++V++ GL L + FH IP+P WV IGES IFYT++SG + K L++ VD+ P+ G+T I++Y ++ +SF+ + F+ Sbjct: 10 LNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFL 170
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 336 VRLFVGLPLDTVSDANTVNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHAL-----KQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM 794 V L+V LPL V+ N +GV + VWWG+ E + +Y+WS Y + ++V+K GLK+ + FH IP+P W+ QIG+ IFYT+++G + + LSL VD+ + G+T +++Y++F ESF+ + F+ Sbjct: 14 VSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKNPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDNMADFL 171
BLAST of CB290256 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.124e-19 Identity = 47/157 (29.94%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 327 LDAVRLFVGLPLDTVSDANT-VNHXXXXXXXXXXXXXXXVEGVELPVWWGVAEKEAMGKYNWSGYLAVAEMVEKIGLKLHVSLCFHALKQP-----KIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSS 779 L+ V ++V LPL V+ N + V+GV + VWWG+ E + +Y+W+ Y + +++ ++GLK+ + FH IP+P WV +G++ I+YT++ G + LS+ VD+LP+ G+T +Q+Y ++ SFK + Sbjct: 11 LNYVPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPDIYYTNRKGTRDIEYLSIGVDNLPLFAGRTAVQLYSDYMSSFKEN 167 The following BLAST results are available for this feature:
BLAST of CB290256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290256 ID=CB290256; Name=CB290256; organism=Citrus sinensis; type=EST; length=797bpback to top |