CB290257

Overview
NameCB290257
Unique NameCB290257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB290257_ssr376 microsatellite CB290257_ssr376:376..387. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig171 contig Csv1_Contig171:43..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INVA_PHAVU (Acid beta-fructofuranosidase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.923e-58
Identity = 107/143 (74.83%), Postives = 127/143 (88.81%), Query Frame = -3
Query:  369 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNFAFIRPYPDDDDERH 797
            RGALGPFGLLVLAD+ LSE TPVYFY+ KG++G+LKT FC+DQSRSS+ NDV K  +G+ VPVLEGEKFS+R+LVDHSIVE FAQGGRT +TSRVYPTKAIYGAAR+FLFNNAT A+VT+SLK WQMN AFIRP+P + D+++
Sbjct:  509 RGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNLKTSFCSDQSRSSQPNDVRKQIFGNIVPVLEGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKIWQMNSAFIRPFPFNPDQKN 651          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INVA_PHAAU (Acid beta-fructofuranosidase OS=Phaseolus aureus GN=INVA PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.923e-58
Identity = 107/142 (75.35%), Postives = 127/142 (89.44%), Query Frame = -3
Query:  372 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNFAFIRPYPDDDDER 797
            RGALGPFGLLVLAD+ LSE TPVYFY+ KG++G+L+T FC+DQSRSS+ANDV K  +GS VPVL+GEKFS+R+LVDHSIVE FAQGGRT +TSRVYPTKAIYGAAR+FLFNNAT A+VT+SLK WQMN AFIRP+P + D++
Sbjct:  507 RGALGPFGLLVLADEGLSEYTPVYFYVIKGRNGNLRTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFNPDQK 648          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INVB_DAUCA (Beta-fructofuranosidase, soluble isoenzyme I OS=Daucus carota GN=INV*DC4 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 4.060e-55
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = -3
Query:  384 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNFAFIRPYPDD 797
            RG LGPFG+LVLADD LSE TPVYFYIAKG DG+ KTYFC DQSRSS A+DV+K  YGS VPVL GE  SMR+LVDHSIVE FAQGGRT ITSRVYPT+AIY AARVFLFNNATG SVT+S+KAWQM  A ++P+P D
Sbjct:  522 RGILGPFGILVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLHGESLSMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMASATLKPFPFD 659          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INVA_VICFA (Acid beta-fructofuranosidase OS=Vicia faba GN=VCINV PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.543e-54
Identity = 106/144 (73.61%), Postives = 118/144 (81.94%), Query Frame = -3
Query:  366 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNFAFIRPYPDDDDERHS 797
            RGALGPFGL VLAD+ LSE TPVYFY+ KG +G L T FC+DQSRSS ANDV+K  YGS VPVLEGEK S+R+LVDHSIVE FAQGGRT ITSRVYPT+AIYGAAR+FLFNNA   +VT+SLK WQMN AFIRPY  D   + S
Sbjct:  499 RGALGPFGLYVLADNGLSEYTPVYFYVVKGINGKLHTSFCSDQSRSSLANDVHKQIYGSVVPVLEGEKLSLRILVDHSIVESFAQGGRTCITSRVYPTRAIYGAARLFLFNNAIETNVTASLKVWQMNSAFIRPYHPDQKRQTS 642          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INV1_MAIZE (Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.067e-51
Identity = 99/137 (72.26%), Postives = 114/137 (83.21%), Query Frame = -3
Query:  390 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASV-TSSLKAWQMNFAFIRPYP 797
            RG LGPFGLLVLADD LSEQT VYFY+ KG DGSL+T+FC D+ R+S+AND+ K  YGS VPVL+GE  S+R+LVDHSIVE FAQGGRT ITSRVYPT+AIY +ARVFLFNNAT A V   S+K WQ+N A+IRPYP
Sbjct:  528 RGLLGPFGLLVLADDDLSEQTAVYFYLLKGTDGSLQTFFCQDELRASKANDLVKRVYGSLVPVLDGENLSVRILVDHSIVESFAQGGRTCITSRVYPTRAIYDSARVFLFNNATHAHVKAKSVKIWQLNSAYIRPYP 664          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INVA_SOLLC (Acid beta-fructofuranosidase OS=Solanum lycopersicum GN=TIV1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.144e-49
Identity = 95/139 (68.35%), Postives = 114/139 (82.01%), Query Frame = -3
Query:  381 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNFAFIRPYPDDD 797
            RG LGPFG++V+AD +LSE TPVYFYI+KG DG  +T+FC DQ+RSSEA  V K  YGS VPVL+GEK SMR+LVDHSIVE FAQGGRT ITSR+YPTKA+ GAAR+F+FNNATGASVT+S+K W +  A I+ +P  D
Sbjct:  497 RGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCADQTRSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANIQSFPLQD 635          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INV1_CAPAN (Acid beta-fructofuranosidase AIV-18 OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.071e-47
Identity = 92/136 (67.65%), Postives = 110/136 (80.88%), Query Frame = -3
Query:  390 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNFAFIRPYP 797
            RG LGPFG++V+AD +LSE TPVYFYI++G DG  + +FC DQ+RSSEA  V K  YGS VPVL+GEK  MR+LVDHSIVE FAQGGRT ITSR+YPTKA+ GAAR+F+FNNATGA VT+SLK W +  A IR +P
Sbjct:  501 RGILGPFGVVVIADQTLSELTPVYFYISRGADGRAEAHFCADQTRSSEAPGVAKQVYGSSVPVLDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGAIVTASLKIWSLESADIRSFP 636          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: GFT_ALLCE (Bifunctional 6(G)-fructosyltransferase/2,1-fructan:2,1-fructan 1-fructosyltransferase OS=Allium cepa PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.942e-42
Identity = 83/132 (62.88%), Postives = 102/132 (77.27%), Query Frame = -3
Query:  405 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASV-TSSLKAWQMNFAF 797
            RG LGPFGLLVLA+  L+E T  YFY++KG DGSL T+FC D++RSS+AND+ K   G  VPVL+GE F++R+LVDHS++E FA GGRT+ TSR YPT+AI  AARVFLFNNATG  V   S+K WQMN  +
Sbjct:  475 RGTLGPFGLLVLANQDLTENTATYFYVSKGIDGSLITHFCQDETRSSKANDIVKRVVGGTVPVLDGETFAVRILVDHSVIESFAMGGRTSATSRAYPTEAINSAARVFLFNNATGVDVIAESVKIWQMNSTY 606          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: GFT_ASPOF (6(G)-fructosyltransferase OS=Asparagus officinalis GN=FT1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.434e-41
Identity = 83/137 (60.58%), Postives = 103/137 (75.18%), Query Frame = -3
Query:  390 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTS-SLKAWQMNFAFIRPYP 797
            RG LGPFGL VLA+  L+E T  YFY+++  DGSL T+ C D+ RSS+AND+ K   G    VL+GE  S+R+LVDHSIVE FAQGGRT+ TSRVYPT+AIY  ARVFLFNNATGA++T+ ++K WQMN    + YP
Sbjct:  469 RGVLGPFGLFVLANQDLTELTATYFYVSRATDGSLHTHLCHDEMRSSKANDIVKRVVGGTFTVLDGELLSLRILVDHSIVESFAQGGRTSATSRVYPTEAIYERARVFLFNNATGATITAKAVKVWQMNSTSNQYYP 605          
BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INV3_DAUCA (Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Daucus carota GN=INV3 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.822e-26
Identity = 62/129 (48.06%), Postives = 78/129 (60.47%), Query Frame = -3
Query:  414 RGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSRSSEANDVNKSKYGSFVPV-LEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMN 797
            +G LGPFGLL LA   L E TPV+F I K +D  LK   C+D  RSS A  + K  +  FV V L  +K S+R L+D+S+VE F    +  I+SRVYPT AIY  A +F+FNN T      +L AW MN
Sbjct:  449 QGGLGPFGLLTLASKDLEEYTPVFFRIFKAEDQKLKVLMCSDAKRSSLAEGLYKPSFRGFVDVDLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPTLAIYNNAHLFVFNNGTEPITVDNLDAWSMN 577          
The following BLAST results are available for this feature:
BLAST of CB290257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
INVA_PHAVU3.923e-5874.83Acid beta-fructofuranosidase OS=Phaseolus vulgaris... [more]
INVA_PHAAU3.923e-5875.35Acid beta-fructofuranosidase OS=Phaseolus aureus G... [more]
INVB_DAUCA4.060e-5576.81Beta-fructofuranosidase, soluble isoenzyme I OS=Da... [more]
INVA_VICFA1.543e-5473.61Acid beta-fructofuranosidase OS=Vicia faba GN=VCIN... [more]
INV1_MAIZE6.067e-5172.26Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3... [more]
INVA_SOLLC1.144e-4968.35Acid beta-fructofuranosidase OS=Solanum lycopersic... [more]
INV1_CAPAN1.071e-4767.65Acid beta-fructofuranosidase AIV-18 OS=Capsicum an... [more]
GFT_ALLCE3.942e-4262.88Bifunctional 6(G)-fructosyltransferase/2,1-fructan... [more]
GFT_ASPOF7.434e-4160.586(G)-fructosyltransferase OS=Asparagus officinalis... [more]
INV3_DAUCA8.822e-2648.06Beta-fructofuranosidase, insoluble isoenzyme 3 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ad06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ad06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290257 ID=CB290257; Name=CB290257; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTACAAAAAGCTAATTCCGATCTGAACATCACGAAATCAAG
AGAGCTGCAATTTTACATCTTTGGGAGGAATCACAATTCACAAATAAATT
CCTCTCCCAACTAGCAACGGTCGAATGACAAAATAACAAAATTAAGAGAC
TACTTTTTTTGTTGTCGAAGATTGGCACATCTTCTACAACTCGGGGGAGA
AAATTAACAAAGGAGGCCGGTGCCAAAGCTTTGAAATTTTGTTTGCAATA
AACATGTATTCTATAAAAAATTGTTGCGGGCGTTTAGAAATAACAAAGAA
CTCGTCAACAAATTGCCGAGATATTTAGTTTTGCTCCCTCTAACTTCATA
TGTTGGTTCCGTCCCCGAGTGCCGTTCATCATCATCATCCGGGTATGGAC
GGATGAATGCAAAATTCATTTGCCATGCTTTGAGTGAGCTTGTAACGCTG
GCGCCGGTAGCATTGTTGAACAAAAATACCCGAGCGGCTCCATAAATTGC
CTTTGTTGGATAAACCCTCGAAGTAATAGTTGTTCTCCCACCTTGAGCAA
AGCCTTCGACTATCGAATGATCCACCAATACTCTCATTGAGAATTTCTCG
CCTTCCAGTACTGGAACAAAGCTACCATATTTTGATTTATTGACATCATT
TGCCTCAGAAGATCTTGATTGATCAGTGCAGAAGTAAGTCTTGAGACTTC
CATCCTTTCCTTTCGCAATGTAGAAATAGACTGGAGTTTGCTCGGATAGG
CTGTCATCTGCAAGAACCAGAAGGCCAAAGGGGCCTAATGCTCCGCGTT
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