CB290316

Overview
NameCB290316
Unique NameCB290316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3988 contig Csv1_Contig3988:33..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.801e-74
Identity = 141/173 (81.50%), Postives = 152/173 (87.86%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SLLFVYSLDYARTRLANDAKAAKKGGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  MQDSF ASF+LGW IT GA LA YPIDTVRRRMMM SG+AVKYKSSL AF +I+KNEG KSLFKG G+NILR         GYDKLQL++F
Sbjct:  205 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLGWLITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGAGVLAGYDKLQLIVF 377          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.444e-73
Identity = 140/172 (81.40%), Postives = 150/172 (87.21%), Query Frame = -3
Query:  268 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVL 783
            SL FVYSLDYARTRLAND KA+KKGGERQFNGL+DVYKKTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  +QDSF ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSSL AF +I+KNEGPKSLFKG GANILR         GYDKLQ+++
Sbjct:  205 SLFFVYSLDYARTRLANDRKASKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLV 376          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 274.633 bits (701), Expect = 4.203e-73
Identity = 138/173 (79.77%), Postives = 150/173 (86.71%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SL FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSSL AFQ+I+K EGPKSLFKG GANILR         GYD+LQ++ F
Sbjct:  206 SLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGNLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 9.363e-73
Identity = 137/173 (79.19%), Postives = 150/173 (86.71%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SL FVYSLDYARTRLANDAKAAK GG+RQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPVVLT  +QD+F ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSSL AFQ+I+K EGPKSLFKG GANILR         GYD+LQ++ F
Sbjct:  206 SLFFVYSLDYARTRLANDAKAAKGGGDRQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 378          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.223e-72
Identity = 138/173 (79.77%), Postives = 149/173 (86.13%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SL FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFGMYDSLKPVVLT  +QD+F ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSS+ AF +I+KNEG KSLFKG GANILR         GYD+LQ++ F
Sbjct:  201 SLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 373          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.647e-72
Identity = 138/174 (79.31%), Postives = 151/174 (86.78%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SLLFVYSLDYARTRLANDAKAAKKGG  RQF+GL+DVY+KTLKSDG+AGLYRGF+ISCVGIIVYRGLYFGMYDSLKPV+LT  M+DSF ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSS  AF +I+KNEGPKSLFKG GAN+LR         GYDKLQ+++F
Sbjct:  204 SLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMEDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGAGVLAGYDKLQVIVF 377          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.766e-71
Identity = 138/174 (79.31%), Postives = 152/174 (87.36%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SLLFVYSLDYARTRLANDAKAAKKGG  RQF+GL+DVY+KTLK+DGIAGLYRGF+ISCVGIIVYRGLYFG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSSL AF++I+KNEG KSLFKG GANILR         GYDKLQL++F
Sbjct:  199 SLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVF 372          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.934e-71
Identity = 137/174 (78.74%), Postives = 149/174 (85.63%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGG-ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SLLFVYSLDYARTRLAND+K+AKKGG ERQFNGL+DVYKKTLKSDGIAGLYRGF+ISC GIIVYRGLYFG+YDS+KPV+LT  +QDSF ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSS  AF +I+K EG KSLFKG GANILR         GYDKLQL++F
Sbjct:  203 SLLFVYSLDYARTRLANDSKSAKKGGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCAGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVF 376          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.495e-70
Identity = 133/173 (76.88%), Postives = 149/173 (86.13%), Query Frame = -3
Query:  268 SLLFVYSLDYARTRLANDAKAAKKGG-ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVL 783
            SL FVYSLDYARTRLANDAK+AKKGG +RQFNGL+DVY+KT+ SDGIAGLYRGF+ISCVGI+VYRGLYFGMYDSLKPVVL   + ++FLA+FLLGWGITIGAGLA YPIDT+RRRMMM SG AVKY SS H FQEI+KNEG KSLFKG GANILR         GYD+LQ++L
Sbjct:  126 SLSFVYSLDYARTRLANDAKSAKKGGGDRQFNGLVDVYRKTIASDGIAGLYRGFNISCVGIVVYRGLYFGMYDSLKPVVLVGPLANNFLAAFLLGWGITIGAGLASYPIDTIRRRMMMTSGSAVKYNSSFHCFQEIVKNEGMKSLFKGAGANILRAVAGAGVLAGYDQLQVIL 298          
BLAST of CB290316 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.330e-70
Identity = 135/173 (78.03%), Postives = 147/173 (84.97%), Query Frame = -3
Query:  265 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMPSGEAVKYKSSLHAFQEIIKNEGPKSLFKGGGANILRXXXXXXXXXGYDKLQLVLF 783
            SL FVYSLDYARTRLANDAKA+K GGERQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDSLKPV+LT  +Q  F ASF LGW IT GAGLA YPIDTVRRRMMM SGEAVKYKSSL AFQ+I+K EG KSLFKG GANILR         GYD+LQ++ F
Sbjct:  150 SLFFVYSLDYARTRLANDAKASKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSLKPVLLTGTLQVCFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 322          
The following BLAST results are available for this feature:
BLAST of CB290316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ADT1_GOSHI3.801e-7481.50ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_SOLTU1.444e-7381.40ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_MAIZE4.203e-7379.77ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT2_MAIZE9.363e-7379.19ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ1.223e-7279.77ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_SOLTU4.647e-7279.31ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_ARATH1.766e-7179.31ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT2_ARATH3.934e-7178.74ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT_CHLRE1.495e-7076.88ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT1_WHEAT3.330e-7078.03ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ag05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ag05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290316 ID=CB290316; Name=CB290316; organism=Citrus sinensis; type=EST; length=785bp
GGATCCCCGGGCTGCACGAGAGAAAACTATTTAATTTATTATCACAACAC
TGTGAGTCTAGGGCTCAAGCACAAAAACACTCAAATTCAAACAGTTCTTT
GACAACTATAATCTTTTCTTTTATCAAATCCCTAAAAACCGGATAAATAT
TAATAACACTATCGATCATCCAAAATTATTCAAGGGGGGGAAGAGCACCT
ATAAAATTTTCACCAACATCTTGTACAAGTATTAACCGCCACCACCGGAT
CCGTATTTCTTGCCAAATAAAACCAGCTGCAGCTTGTCATAACCGGCAAG
CACACCAGCACCTGCCACAGCACGCAAAATGTTTGCACCACCACCTTTGA
AGAGGGATTTAGGGCCTTCATTCTTTATAATTTCCTGGAATGCATGCAAA
GAGCTCTTGTACTTCACAGCTTCTCCAGAGGGCATCATCATCCTTCTACG
CACCGTATCAATTGGGTAAAAAGCCAAACCAGCACCAATTGTGATTCCCC
AGCCAAGTAAGAAGCTAGCCAAAAAACTATCCTGCATCCCATCAGTCAAC
ACCACAGGTTTTAAAGAATCGTACATTCCAAAGTAAAGCCCACGATACAC
TATAATTCCAACACATGAGATGCTGAATCCACGGTAGAGCCCAGCAATGC
CATCAGATTTCAGAGTCTTCTTGTAGACATCAATCAAACCATTAAACTGC
CTTTCCCCACCCTTTTTAGCTGCCTTAGCATCATTTGCCAAACGTGTTCT
TGCATAGTCAAGCGAATACACAAAAAGAAGCGATG
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