CB290317

Overview
NameCB290317
Unique NameCB290317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1975 contig Csv1_Contig1975:8..799. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.749e-88
Identity = 172/257 (66.93%), Postives = 192/257 (74.71%), Query Frame = 2
Query:   56 MAD-GSYPSVFQKMQGQSYFIS-----------GVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            MAD   +P+VFQK   Q    S           GV P +Y  +++  G++ N G Q     A+Q   L + S  SP+FVQAP EK  ++F  DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLS PYKGI +CFGRT+K+EG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLAND KA+KKGGERQFNGL+DVYKKTLKSDGIAGL
Sbjct:    1 MADMNQHPTVFQKAANQLDLRSSLSQDVHARYGGVQPAIYQRHFAY-GNYSNAGLQRG--QATQDLSL-ITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDRKASKKGGERQFNGLVDVYKKTLKSDGIAGL 253          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.039e-87
Identity = 167/256 (65.23%), Postives = 192/256 (75.00%), Query Frame = 2
Query:   59 ADGSYPSVFQKMQGQSYFISGVSPNLYAHNYSVA-----------GSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGIAGL 790
            AD  +P+V+QK+  Q +  S +S +++A    +            G++ N G Q     A+Q   L + +  SP+FVQAP EK L++F  DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKK GG RQF+GL+DVY+KTLKSDG+AGL
Sbjct:    1 ADNQHPTVYQKVASQMHLSSSLSQDVHARYGGIQRPALSQRRFPYGNYSNAGLQTC--QATQDLSL-IAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGGAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKSDGVAGL 253          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.969e-87
Identity = 175/252 (69.44%), Postives = 188/252 (74.60%), Query Frame = 2
Query:   71 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALV-SPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            +PSV QK+ GQ            Y  S  SP LY    +  G++ N   Q+   A      L++V S  S I VQAP+EK  SSF +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKKGGERQFNGL+DVY+KTLKSDGIAGL
Sbjct:    6 HPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRR-AAYGNYSNAALQHPVRAFGD---LSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGL 253          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.508e-86
Identity = 168/254 (66.14%), Postives = 187/254 (73.62%), Query Frame = 2
Query:   56 MAD-GSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGS-----FVNRGSQN-SFWAASQGTGLALVSPV--SPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            MAD  + P+V  K+ GQ +  S  S  + A N   + S     F  R     S W  S      +  PV  +P+F  AP+EK   +F++DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI+DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GG+RQFNGL+DVY+KTLKSDGIAGL
Sbjct:    1 MADQANQPTVLHKLGGQFHLSSSFSEGVRARNICPSFSPYERRFATRNYMTQSLWGPSMSVSGGINVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGDRQFNGLVDVYRKTLKSDGIAGL 254          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.970e-86
Identity = 165/243 (67.90%), Postives = 185/243 (76.13%), Query Frame = 2
Query:   74 PSVFQKMQGQSYFISGVSPNLYAHNYSVA-GSFVNRGSQNSFWA---ASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            P+V QK  GQ +  S  S  + A N   +  S+  R +  S+      + G  + ++S  SPIF  AP+EK   +F++DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWF GN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGIAGL
Sbjct:    8 PTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRFTTRSYMTQGLVNGGINVPMMSS-SPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGL 249          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 2.573e-86
Identity = 164/252 (65.08%), Postives = 189/252 (75.00%), Query Frame = 2
Query:   71 YPSVFQKMQGQ-----------SYFISGVSPNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGIAGL 790
            +P++ QK+ GQ            Y  +   P  Y   ++  G++ N   Q    AASQ     + +  SP+FVQAP EK  ++F +DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+ PYKGI DCFGRT++DEGI SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD+DGYWKWFAGN             FVYSLDYARTRLAND+K+AKK GGERQFNGL+DVYKKTLKSDGIAGL
Sbjct:    7 HPTILQKVSGQLLSSSVSQDIRGYASASKRPATY-QKHAAYGNYSNAAFQYPLVAASQ-----IATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKSAKKGGGERQFNGLVDVYKKTLKSDGIAGL 252          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 316.235 bits (809), Expect = 1.277e-85
Identity = 168/254 (66.14%), Postives = 188/254 (74.02%), Query Frame = 2
Query:   56 MAD-GSYPSVFQKMQGQSYFISGVSPNLYAHNYSVAGSFVNR--GSQN----SFWAASQGTGLALVSPV--SPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            MAD  + P+V  K+ GQ +  S +S  + A N   + S   R   ++N    S W  S      +  PV  +P+   AP+EK   +F++DF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLS PYKGI DCF RT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAK GGERQFNGL+DVY+KTLKSDGIAGL
Sbjct:    1 MADQANQPTVLHKLGGQFHLRSIISEGVRARNICPSVSSYERRFATRNYMTQSLWGPSMSVSGGINVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGL 254          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.107e-84
Identity = 165/250 (66.00%), Postives = 186/250 (74.40%), Query Frame = 2
Query:   71 YPSVFQKMQGQSYFISGVS---------PNLYAHNYSVAGSFVNRGSQNSFWAASQGTGLALVSPVSPIFVQAPSEKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKK-GGERQFNGLIDVYKKTLKSDGIAGL 790
            +P++ QK  GQ +  S VS         P++Y   ++  G++ N   Q         T   L +  SP+FVQ P EK  ++F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKK GG RQF+GL+DVY+KTLK+DGIAGL
Sbjct:    7 HPTIAQKAAGQ-FMRSSVSKDVQVGYQRPSMY-QRHATYGNYSNAAFQ------FPPTSRMLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLKTDGIAGL 248          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.557e-82
Identity = 150/194 (77.32%), Postives = 164/194 (84.54%), Query Frame = 2
Query:  212 GTGLALVSPVSPIFVQAPSEKS-LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            G  + ++SP SP+F  AP EK  + +F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDYARTRLANDAKA+K GGERQFNGL+DVY+KTLKSDGIAGL
Sbjct:    6 GISVPIMSP-SPMFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYARTRLANDAKASKGGGERQFNGLVDVYRKTLKSDGIAGL 198          
BLAST of CB290317 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.109e-80
Identity = 145/184 (78.80%), Postives = 157/184 (85.33%), Query Frame = 2
Query:  242 SPIFVQAPSEKS-LSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGL 790
            SP+F  AP EK  + +F +DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLS PYKGI DCFGRT+KDEG  SLWRGNTANVIRYFPTQALNFAFKDYFKR+FNFKKD+DGYWKWF GN             FVYSLDY RTRLANDAKA+K GG+RQFNGL+DVY+KTLKSDGIAGL
Sbjct:   15 SPLFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYSLDYGRTRLANDAKASKGGGDRQFNGLVDVYRKTLKSDGIAGL 198          
The following BLAST results are available for this feature:
BLAST of CB290317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
ADT1_SOLTU2.749e-8866.93ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_SOLTU3.039e-8765.23ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_GOSHI3.969e-8769.44ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_MAIZE1.508e-8666.14ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ1.970e-8667.90ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_ARATH2.573e-8665.08ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT1_MAIZE1.277e-8566.14ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT1_ARATH4.107e-8466.00ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_WHEAT6.557e-8277.32ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT2_WHEAT2.109e-8078.80ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ag05_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ag05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290317 ID=CB290317; Name=CB290317; organism=Citrus sinensis; type=EST; length=792bp
GCCCTTAGGTCTCACACTAGGCGACCTTCTCAGGTCACCATCCCCAGCTG
CAAACATGGCAGATGGATCGTATCCATCCGTATTTCAGAAAATGCAAGGC
CAGTCATACTTCATTTCTGGGGTCTCCCCCAATTTGTATGCCCACAACTA
CAGTGTGGCAGGTTCCTTTGTTAATAGAGGATCACAGAATTCTTTTTGGG
CAGCAAGTCAGGGAACTGGCCTGGCACTTGTGTCTCCTGTTTCTCCTATA
TTCGTACAAGCTCCATCAGAAAAAAGTCTTTCTTCTTTTTTGGTGGATTT
TCTCATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGCTGCTCCTA
TTGAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGATCAAGAGT
GGTCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTTGGTAGAAC
TGTTAAGGATGAAGGCATACTATCTCTTTGGAGAGGCAACACTGCCAATG
TTATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCAAGGATTAC
TTTAAGAGGCTGTTTAACTTCAAGAAAGACAGAGATGGCTACTGGAAGTG
GTTTGCTGGGAACTTGGCATCTGGTGGGGCTGCTGGTGCTTCATCGCTTC
TTTTTGTGTATTCGCTTGACTATGCAAGAACACGTTTGGCAAATGATGCT
AAGGCAGCTAAAAAGGGTGGGGAAAGGCAGTTTAATGGTTTGATTGATGT
CTACAAGAAGACTCTGAAATCTGATGGCATTGCTGGGCTCTA
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