CB290318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290318 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.965e-17 Identity = 39/55 (70.91%), Postives = 50/55 (90.91%), Query Frame = -3 Query: 388 DHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNSNRSQAEG 552 +HP+NK+V+AVGKA G KWK+MS+A+KAPYVAK+EKRKVEYEK+M+ N+ QAEG Sbjct: 65 EHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
BLAST of CB290318 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.377e-14 Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = -3 Query: 388 HPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNSNRSQAEG 549 HP NKSVA VGKAGG+KWK ++ A+KAP+++KAEKRK EYEK+++ N+ QA G Sbjct: 58 HPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111
BLAST of CB290318 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13 Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = -3 Query: 394 HPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNSNRSQA 549 +PKNKSVAAVGKA G++WKS+SE+DKAPYVAKA K K+EY K + N+ ++ Sbjct: 63 NPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGES 114
BLAST of CB290318 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = -3 Query: 394 HPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNSNRSQA 549 +PKNKSVAAVGKA GE+WKS+SE++KAPYVAKA K K EY K + N+ ++ Sbjct: 64 NPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGES 115
BLAST of CB290318 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-11 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 403 DHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNSNR 552 DHP NKSVAAVGKA GE+WKS+SE +KAPYV +A K+K EYE ++ N+ Sbjct: 66 DHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNK 115 The following BLAST results are available for this feature:
BLAST of CB290318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290318 ID=CB290318; Name=CB290318; organism=Citrus sinensis; type=EST; length=560bpback to top |