CB290347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290347 vs. ExPASy Swiss-Prot
Match: TAF7_MOUSE (Transcription initiation factor TFIID subunit 7 OS=Mus musculus GN=Taf7 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.392e-12 Identity = 55/184 (29.89%), Postives = 75/184 (40.76%), Query Frame = 1 Query: 10 QFILRVPPSVAHRIDRXXXXXXXXXXXXXXXXXXXQDGRSGTFVIGNDHFPVSLMDLPCVVESFKTYDDCALVKTADIGQMIMVREPGDSTPDAVE----------------------YRHGLTPPMRDARKRRFRR--------EPDLNPELVQRVEKDLLNIMTGATVENADPEVNEQEEEG 471 QFILR+PP A + R DGR G + L+DLPCV ES KT D KTADI QM++ GD P E + HG+T P+++ RKRRFR+ PD+ E+ + + D + T + A+ E E E +G Sbjct: 15 QFILRLPPEYAATV-RRAVQSGHVNLKDKLSIELHPDGRHGIVRVDRVPLAAKLVDLPCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKKKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEI-IAEDETKETENQG 196
BLAST of CB290347 vs. ExPASy Swiss-Prot
Match: TAF7_CRIGR (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus GN=TAF7 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.329e-12 Identity = 55/184 (29.89%), Postives = 76/184 (41.30%), Query Frame = 1 Query: 10 QFILRVPPSVAHRIDRXXXXXXXXXXXXXXXXXXXQDGRSGTFVIGNDHFPVSLMDLPCVVESFKTYDDCALVKTADIGQMIMVREPGDSTPDAVE----------------------YRHGLTPPMRDARKRRFRR--------EPDLNPELVQRVEKDLLNIMTGATVENADPEVNEQEEEG 471 QFILR+PP A + R DGR G + L+DLPCV+ES KT D KTADI QM++ GD P E + HG+T P+++ RKRRFR+ PD+ E+ + + D + T + A+ E E E +G Sbjct: 15 QFILRLPPEYASTV-RRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVPLAAKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEI-IAEDETKETENQG 196
BLAST of CB290347 vs. ExPASy Swiss-Prot
Match: TAF7_PONAB (Transcription initiation factor TFIID subunit 7 OS=Pongo abelii GN=TAF7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 55/184 (29.89%), Postives = 76/184 (41.30%), Query Frame = 1 Query: 10 QFILRVPPSVAHRIDRXXXXXXXXXXXXXXXXXXXQDGRSGTFVIGNDHFPVSLMDLPCVVESFKTYDDCALVKTADIGQMIMVREPGDSTPDAVE----------------------YRHGLTPPMRDARKRRFRR--------EPDLNPELVQRVEKDLLNIMTGATVENADPEVNEQEEEG 471 QFILR+PP A + R DGR G + L+DLPCV+ES KT D KTADI QM++ GD P E + HG+T P+++ RKRRFR+ PD+ E+ + + D + T + A+ E E E +G Sbjct: 15 QFILRLPPEYASTV-RRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEI-IAEDETKEAENQG 196
BLAST of CB290347 vs. ExPASy Swiss-Prot
Match: TAF7_MACFA (Transcription initiation factor TFIID subunit 7 OS=Macaca fascicularis GN=TAF7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 55/184 (29.89%), Postives = 76/184 (41.30%), Query Frame = 1 Query: 10 QFILRVPPSVAHRIDRXXXXXXXXXXXXXXXXXXXQDGRSGTFVIGNDHFPVSLMDLPCVVESFKTYDDCALVKTADIGQMIMVREPGDSTPDAVE----------------------YRHGLTPPMRDARKRRFRR--------EPDLNPELVQRVEKDLLNIMTGATVENADPEVNEQEEEG 471 QFILR+PP A + R DGR G + L+DLPCV+ES KT D KTADI QM++ GD P E + HG+T P+++ RKRRFR+ PD+ E+ + + D + T + A+ E E E +G Sbjct: 15 QFILRLPPEYASTV-RRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEI-IAEDETKEAENQG 196
BLAST of CB290347 vs. ExPASy Swiss-Prot
Match: TAF7_HUMAN (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens GN=TAF7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.091e-12 Identity = 55/184 (29.89%), Postives = 76/184 (41.30%), Query Frame = 1 Query: 10 QFILRVPPSVAHRIDRXXXXXXXXXXXXXXXXXXXQDGRSGTFVIGNDHFPVSLMDLPCVVESFKTYDDCALVKTADIGQMIMVREPGDSTPDAVE----------------------YRHGLTPPMRDARKRRFRR--------EPDLNPELVQRVEKDLLNIMTGATVENADPEVNEQEEEG 471 QFILR+PP A + R DGR G + L+DLPCV+ES KT D KTADI QM++ GD P E + HG+T P+++ RKRRFR+ PD+ E+ + + D + T + A+ E E E +G Sbjct: 15 QFILRLPPEYASTV-RRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEI-IAEDETKEAENQG 196
BLAST of CB290347 vs. ExPASy Swiss-Prot
Match: TAF7L_MOUSE (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus GN=Taf7l PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11 Identity = 48/164 (29.27%), Postives = 70/164 (42.68%), Query Frame = 1 Query: 10 QFILRVPPSVAHRIDRXXXXXXXXXXXXXXXXXXXQDGRSGTFVIGNDHFPVSLMDLPCVVESFKTYDDCALVKTADIGQMIMV----------REPGDSTPDAV-------------EYRHGLTPPMRDARKRRFRREPDLNPELVQRVEKDLLNIMTGATVE 432 QFILR+PP A+ + R DG + N P L++LPCV+ S KT D KTAD+ QM++ EP ST V ++HG+TPP+++ RK+RFR+ P++ Q E + +VE Sbjct: 109 QFILRLPPEQAYAV-RKIIHSRNAAWKDKLKIDFSPDGHHAVVQVDNVSLPAKLVNLPCVIGSLKTIDRKTFYKTADVSQMLVCSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKKYNWKHGITPPLKNVRKKRFRKTTKKLPDVKQVDEINFSEYTQSPSVE 271 The following BLAST results are available for this feature:
BLAST of CB290347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290347 ID=CB290347; Name=CB290347; organism=Citrus sinensis; type=EST; length=778bpback to top |