CB290426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.512e-69 Identity = 123/166 (74.10%), Postives = 140/166 (84.34%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DLVS++ TIIWLA AQHAALNFGQYPYGGYVPNRPPLMRRL+PDE+DPE+TSF+ +P KYF ++P +LQ TK+MAVVDTL THSPDEEY+GERQQP IW+GD EI +AF+ FSA RN DPSRRNRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI Sbjct: 761 DLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEFTSFIEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.183e-68 Identity = 122/166 (73.49%), Postives = 138/166 (83.13%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DLVSIL T+IWLA AQHAALNFGQYPYGGYVPNRPPLMRRL+PDE+DPEY SF+ P KY+ ++P + Q +K+MAVVDTL THSPDEEY+GERQQP IW+GD EI EAF+ F+A RN+DP RRNRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI Sbjct: 754 DLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 4.722e-55 Identity = 103/166 (62.05%), Postives = 121/166 (72.89%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DL S+L T++WL AQHAALNFGQYP GGY+PNRPPLMRRLVP E DPEY + +PH++FL ALP + Q T +M V+DTL THS DEEYLGER W+ D A EF+A RN+DPSRRNRCGAGVLPYEL+ PSS PG+TC+GVPNSV+I Sbjct: 735 DLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAEGDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDE-AWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.984e-53 Identity = 108/170 (63.53%), Postives = 127/170 (74.71%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPD-END-PEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGE-RQQPWI-WSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DL SIL T++WLA AQHAALNFGQYP GGYVPNRPPL+RRL+PD E D EY +FL +PH++FL A+P VL+ TK+MAVVDTL THSPDEEYLGE R + + W+ D A F+A RN+D R+NRCGAGVLPYELL PSS PGVTC+GVPNS+SI Sbjct: 749 DLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.687e-42 Identity = 88/167 (52.69%), Postives = 111/167 (66.47%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGE-RQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DL IL +IW+A QHAA+NFGQYP+GGYVPNRP L+R+L+P E DP+Y F+ P FL +LP LQ TK MAV +TL THSPDEEYL E R+ W D ++ + F +FS RN D +NR GAG+ PYELL+P+S GVT +G+PNS+SI Sbjct: 751 DLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.057e-38 Identity = 80/168 (47.62%), Postives = 106/168 (63.10%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDEN--DPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 +LV IL I+W+ HAA+NFGQY Y GY PNRP ++RR +P E D E F+ P + L +LP +Q K MA +D L +HSPDEEY+GE +P W + + AF +FS RN++P +NRCGAG++PYELL P SEPGVT +G+PNS+SI Sbjct: 730 NLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEP-AWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.889e-33 Identity = 76/166 (45.78%), Postives = 97/166 (58.43%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DL+ I+W A A HAA+NFGQYPYGG + NRP L RR +P E PEY + P K +L + + ++V++ L H+ DE YLGER+ P W+ D + EAF F + RNSDPS RNR G LPY LL SSE G+T KG+PNS+SI Sbjct: 700 DLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETP-NWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33 Identity = 74/167 (44.31%), Postives = 101/167 (60.48%), Query Frame = -2 Query: 244 DLVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPS-RRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 741 DLV + + IIW+A A HAA+NFGQYPYGG + NRP RRL+P++ PEY + K +L + L ++V++ L TH+ DE YLG+R P W+ D + +AF +F RN+DPS + NR G LPY LL PSSE G+T +G+PNS+SI Sbjct: 674 DLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.478e-32 Identity = 76/169 (44.97%), Postives = 100/169 (59.17%), Query Frame = -2 Query: 244 LVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTS---FLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLG-ERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 738 L L TI+W+A A HAA+NFGQY +GGY PNRP + R ++P E + + FL P + P +Q T MAV+D L THS DEEYLG E+ +PW + D + A+ F+A RN D +NRCGAG+LPY+L+ P S+ GVT G+PNS SI Sbjct: 775 LAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPW--NSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of CB290426 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.930e-32 Identity = 78/171 (45.61%), Postives = 98/171 (57.31%), Query Frame = -2 Query: 244 LVSILITIIWLAFAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDP-EYTSFLVEPHKYFLLALPRVLQGTKYMAVVDTLFTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSAXXXXXXXXXXXRNSDPSRRNRCGAGVLPYELLVPSSEPGVTCK-----GVPNSVSI 738 LV +L TI+W+ A HAA+NFGQYP GYVPN P + RR +P E P E +F P K +L LP LQ MA +D L +H+ DEEY+G Q+P W DGE+ +AF F N D SRRNR GAGV+PY LL P + + K G+PNS+SI Sbjct: 763 LVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEMLAFKAAPEKVWLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEP-AWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932 The following BLAST results are available for this feature:
BLAST of CB290426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290426 ID=CB290426; Name=CB290426; organism=Citrus sinensis; type=EST; length=742bpback to top |