CB290433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.079e-39 Identity = 79/135 (58.52%), Postives = 98/135 (72.59%), Query Frame = -1 Query: 391 LVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIEPASQKAQNLVSEAQPGGPRAAVHYAAAESKPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 795 LVFLD KV E S KFDEHAPP+AK+V +Q H LI A++KAQ+ V EA+ GGP+AA +YAA E K +VTNSVK W KLN Y M D A+P AA +S +YN LV +MT GY + GYLPLVP+DDI KA+++ Sbjct: 74 LVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = -1 Query: 391 LVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIEPASQKAQNLVSEAQPGG-----------------PRAAVHYAAAESKPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 795 L ++D+KVD + + D PP+ K+V++Q S + A A+ L SE + G P A YA E P +V AW KLN LFP +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP + I+K F + Sbjct: 83 LKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYE--PKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = -1 Query: 394 LVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIEPASQKAQNLVSEAQ-PGGPRAAVH-----YAAAES---------KPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFK 795 L+F+D+KV+ + + + H P L KR + Q ++ + A + A + SE Q PG A + Y+ E +P+ +V AW LN LFP +A + VPTAA WS+KYN V ++GY V YLPL+P + IAK F+ Sbjct: 81 LMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQ 229
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.145e-15 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = -1 Query: 397 LVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIEPASQKAQNLVSEAQPGGPRAAVHYAAAESKPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 795 L + D+KV E D H P K+V+SQ A+++VSE + G ++ +P +V AW KLN LFP +A+ +P AA ++KYN ++V +KGY V YLPLVP + IAK F Sbjct: 47 LKYADRKVGE----LDRHVPSNVKKVSSQ-----------ARSVVSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = -1 Query: 397 FLDKKVDEASRKFDEHAPPLAKRVASQVHSLIEPASQKAQNLVSEAQPGGPRAAVHYAAAESKPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 789 F+DK VD + D PP+ K+V++Q +S+ + A + ++ S G + A +P +V W LN L P +A++ VPTA +S+KYN +V T++GY V YLPL+P + I K F Sbjct: 69 FVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVF 199
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12 Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = -1 Query: 397 LVFLDKKVDEASRKFDEHAPP-------LAKRVASQVHS--LIEPASQKAQNLVSEAQPGGPRAAVHYAAAESKPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 795 L FLD+KV E+ ++ D PP LA+ A++V L+ A+ A++ ++ A+P RA Y E P+ + +AW LN L P + +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 96 LKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEP---RARDLYTRYE--PVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232
BLAST of CB290433 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12 Identity = 47/142 (33.10%), Postives = 73/142 (51.41%), Query Frame = -1 Query: 397 LVFLDKKVDEASRKFDEHAPP-------LAKRVASQVHS--LIEPASQKAQNLVSEAQPGGPRAAVHYAAAESKPLLVTNSVKAWYKLNHYALFPPMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 795 L FLD+KV E+ ++ D PP LA+ A++V L+ A+ A++ ++ A+P RA Y E P+ + +AW LN L P + +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 96 LKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEP---RARDLYTRYE--PVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232 The following BLAST results are available for this feature:
BLAST of CB290433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290433 ID=CB290433; Name=CB290433; organism=Citrus sinensis; type=EST; length=795bpback to top |