CB290445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_SYNY3 (Riboflavin biosynthesis protein ribD OS=Synechocystis sp. (strain PCC 6803) GN=ribD PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.153e-28 Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = 2 Query: 158 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHG-DHTAVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 G T+P+P G +I ++ G+G+ G E+ A+ G +GAT Y+N+EP + G A++QAGI +VVVG+ +P + G+ + LR G++V V E+ ++C +N R + PF +FKYAMTLD GKIA + H++W++S ++R V LR + AV++GGNTVRRDNP LT Sbjct: 20 GKTAPNPLVGSVIVQGD-EIVGQGFHPQAGQPHGEIFALWEAGDRAKGATLYVNLEPCNHQGRTPPCTEAIIQAGIAKVVVGMVDPNPLVAGKGISRLRQAGIEVKVGVEE----------EACQRLNEAFCFRIKHQRPFGIFKYAMTLD------------GKIATAQAHSSWVTSSSARHWVHQLRSQCQAVIIGGNTVRRDNPLLT 206
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_AQUAE (Riboflavin biosynthesis protein ribD OS=Aquifex aeolicus GN=ribD PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.585e-22 Identity = 74/213 (34.74%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 149 KSAGFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHG-DHTAVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 K G+T P+P G ++ GK+ G GY G AEV A+ G +GAT Y+ +EP G A++++GI RVVV +P + G+ V LR+ G++V V EEAR+ +N T P+ K+A TLD GK+A +G + WI+SK SR LR + AV+VG NTV +D+P LT Sbjct: 19 KRKGYTHPNPTVGAVVVKE-GKIVGLGYHEKAGKPHAEVMALGQAGEKAKGATLYVTLEPCTHFGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEKLRNAGIEVDV------GVCEEEARE----LNEDFFTYITQERPYITLKWAQTLD------------GKLATLTGSSKWITSKESRKVAHILRREATAVLVGVNTVIKDDPHLT 208
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_ECOLI (Riboflavin biosynthesis protein ribD OS=Escherichia coli (strain K12) GN=ribD PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20 Identity = 66/208 (31.73%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 164 TSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHG-DHTAVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 T P+PN GC+I G++ GEGY G AEV A+ G +GATAY+ +EP HG AL+ AG+ RVV +++P + G+ + L+ G+ V ++ EA + +N + R + P+ K +LD G+ A +SG + WI+S +R V LR +S A++ TV D+P LT Sbjct: 21 THPNPNVGCVIVKD-GEIVGEGYHQRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVS------HGLMMSEAEQ----LNKGFLKRMRTGFPYIQLKLGASLD------------GRTAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALT 205
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_BUCBP (Riboflavin biosynthesis protein ribD OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ribD PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20 Identity = 64/208 (30.77%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 164 TSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHTAVS-ALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 TSP+PN GC+I + + G G+ G K AE+ A++ G +GATAY+ +EP G AL + GI+RVV+ +P + G V+ L+ G+ V I K + +N R T+ +P+ K A ++D G+ A ++G + WI+S +R V +R +SDA++ T+ DNP LT Sbjct: 21 TSPNPNVGCIIVNNN-IIVGSGWHKKTGMKHAEIYALKTSGEKAKGATAYITLEPCSHFGKTPPCCVALTKYGISRVVIATLDPNPKVSGNGVKWLKKHGILV----------TIGTLSKESIKINKGFFQRMTTGIPWIKLKLASSID------------GRTALNNGKSKWITSDKARHDVQHVREKSDAIISSSETILFDNPLLT 205
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_ACTPL (Riboflavin biosynthesis protein ribD OS=Actinobacillus pleuropneumoniae GN=ribD PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20 Identity = 70/209 (33.49%), Postives = 105/209 (50.24%), Query Frame = 2 Query: 158 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHTAVS-ALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRL 781 G+T+P+P GC+I + G++ EGY G AE AV GATAY+ +EP HG S L++ GI +V +G +P + G+ LR G++V ++ + EE C +N H ++ P+ + KYAMT D GKIA SG + WI+ +++R RV R + A++VG +TV DNP L Sbjct: 31 GWTNPNPLVGCVIVKN-GEIVAEGYHEKIGGWHAERNAVLHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEV------VEGLLKEE----CDALNPIFFHYIQTKRPYVLMKYAMTAD------------GKIATGSGESKWITGESARARVQQTRHQYSAIMVGVDTVLADNPML 216
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_HAEIN (Riboflavin biosynthesis protein ribD OS=Haemophilus influenzae GN=ribD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.607e-18 Identity = 58/207 (28.02%), Postives = 104/207 (50.24%), Query Frame = 2 Query: 164 TSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHG-DHTAVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRL 781 T+P+P+ GC++ + G++ GEG+ + G AE A+ G +GATAY+ +EP +G L++AG+ +V+ +++P + G+ ++ L G+ E + + ++A K +N + R +PF K AM+LD G+ A +SG + WI+ +R V +R +S A++ TV D+P L Sbjct: 26 TTPNPSVGCVLVKN-GEIVGEGFHFKAGQPHAERVALAQAGENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGI------ESTVNLLNDQAEK----INKGFLKRMRQGMPFVQLKLAMSLD------------GRTAMASGESKWITGPDARSDVQKMRAKSSALLSTSTTVIADDPSL 209
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_BACSU (Riboflavin biosynthesis protein ribD OS=Bacillus subtilis GN=ribD PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.120e-16 Identity = 58/210 (27.62%), Postives = 100/210 (47.62%), Query Frame = 2 Query: 158 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHTAVSALV-QAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHVLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 G T +P G ++ G++ G G G AEV A+ G+ GA Y+ +EP +G + L+ +GI RV V +R+P + G+ + ++ G++V + + ++A + +N +H + +P+ K A +LD GKIA S+G + WI+S+ +R R +++VG TV+ DNP LT Sbjct: 18 GQTESNPLVGAVVVKD-GQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVR------EGILADQAER----LNEKFLHFMRTGLPYVTLKAAASLD------------GKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLT 204
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_MYCTU (Riboflavin biosynthesis protein ribD OS=Mycobacterium tuberculosis GN=ribD PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16 Identity = 64/212 (30.19%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 158 GFTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHT-AVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVH--VLGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 G T P P G +I G++ G G G AEV A+ G GA + MEP + +G V+AL++A + VV + +P + G L + GLQV VL E + + + E +H+ + +P +KYA ++D G+ AA+ G + WISS+ +R + R +DA++VG TV D+P LT Sbjct: 25 GTTYPKPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLAAGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADP-NGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLRE-----------WLHKQRTGLPHVTWKYATSID------------GRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLADDPALT 212
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_CHLTR (Riboflavin biosynthesis protein ribD OS=Chlamydia trachomatis GN=ribD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.056e-16 Identity = 67/211 (31.75%), Postives = 104/211 (49.29%), Query Frame = 2 Query: 161 FTSPHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGDHT--AVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHV-LGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 F P+P GC+I + G V GEG+ G+ AEV AV+ GA ++ +EP CH T V L+++ + V VG+ +P + + V L++ G+ V+V +G +EA+ S P +++ +P+ V K A +LD G+ A G + WIS + +R V LR S A++VG TV DNPRL+ Sbjct: 25 FAPPNPWVGCVIVKN-GCVIGEGWHQGIGSPHAEVCAVQDQKCSLEGAEVFVTLEPC-CHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKKGVARLQAAGIPVYVGVGS-------QEAKTSL----QPYLYQRERGLPWVVMKTAASLD------------GQTADRGGSSQWISGELARADVGKLRAESQAIIVGARTVCLDNPRLS 210
BLAST of CB290445 vs. ExPASy Swiss-Prot
Match: RIBD_CHLPN (Riboflavin biosynthesis protein ribD OS=Chlamydia pneumoniae GN=ribD PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.795e-15 Identity = 60/207 (28.99%), Postives = 101/207 (48.79%), Query Frame = 2 Query: 170 PHPNFGCLIATSTGKVAGEGYLYAQGTKPAEVQAVEAGGSFCRGATAYLNMEPGDCHGD-HTAVSALVQAGITRVVVGIRNPLQHLRGQAVRALRSQGLQVHV-LGEDLQSKIIEEARKSCLLVNAPLIHRATSRVPFSVFKYAMTLDVILPGVLSWMLTGKIAASSGHAAWISSKTSRDRVFDLRGRSDAVVVGGNTVRRDNPRLT 784 P+P GC++ ++ GEG+ G AE A++ G+ Y+++EP G + L++ ++RV V + +P + GQ + LR G+QV+V +GE EA+ S P +++ T P+++ K A ++D G++A S G + WI+ +R V LR S A++VG TV D+P LT Sbjct: 28 PNPWVGCVVVQEN-RIIGEGFHAYAGGPHAEELAIQNASMPISGSDVYVSLEPCSHFGSCPPCANLLIKHKVSRVFVALVDPDPKVAGQGIAMLRQAGIQVYVGIGES-------EAQASL----QPYLYQRTHNFPWTILKSAASVD------------GQVADSQGKSQWITCPEARHDVGKLRAESQAILVGSRTVLSDDPWLT 210 The following BLAST results are available for this feature:
BLAST of CB290445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290445 ID=CB290445; Name=CB290445; organism=Citrus sinensis; type=EST; length=786bpback to top |