CB290491

Overview
NameCB290491
Unique NameCB290491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB290491 vs. ExPASy Swiss-Prot
Match: Y3725_ARATH (GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana GN=At3g49725 PE=2 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.458e-67
Identity = 140/252 (55.56%), Postives = 158/252 (62.70%), Query Frame = 3 
Query:    9 PTFLQAKLNEALCLANSLEEQRDGYFDTDFFDKELPPHVVVQNPSLKSGKARADTFFGPGTVETIKCHINGAESKGELDAIFVNAILSGIQQRNLERAWGKPVLDRVGLIIEIFNAHAHTXXXXXXXXXXXXMYKKSRLVRVRGPDGRLTFGETGEAEVVXXXXXXXXXXXXXXXXX---ETXXXXXXXXXXXXXXXXXXQIEEVXXXXXXXXXXXXXHGGSDGRGLATVAVVGYTNAGKSTLVGALSDSDL 755
            P +LQAKLNEALCLANSLEEQR GYF++DFFDKELP HVVVQNP  +S K R DT+FG GTV+ IKCH+N  +SK E+DA+FVNAIL+ IQQRNLER W KPVLDRVGLIIEIFNAHAHT            MY KSRLVRVRG DGR TFG+ GEAEVV                    ET                  QI+E                G +G    T+AVVGYTNAGKSTL+ AL+ + L
Sbjct:  119 PKYLQAKLNEALCLANSLEEQRYGYFESDFFDKELPSHVVVQNPVRRSSKPRVDTYFGSGTVDNIKCHLNAEDSKEEVDAVFVNAILTAIQQRNLERIWAKPVLDRVGLIIEIFNAHAHTKEAKLQAELAALMYNKSRLVRVRGTDGRHTFGQFGEAEVVSARGRAGSKGTGGGFVGGAGETELQLQRRRISDRRIRLLSQIKEAQRTRLLQRAGRKKRVGLEGESSGTIAVVGYTNAGKSTLISALTKTAL 370
The following BLAST results are available for this feature:
BLAST of CB290491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3725_ARATH1.458e-6755.56GTP-binding protein At3g49725, chloroplastic OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01bg11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01bg11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290491 ID=CB290491; Name=CB290491; organism=Citrus sinensis; type=EST; length=757bp
GCCCGTGGCCCACCTTCTTACAAGCCAAGCTTAACGAAGCTCTCTGTCTT
GCCAACTCTCTCGAAGAACAGCGTGATGGCTACTTTGACACTGATTTCTT
TGATAAAGAACTGCCCCCTCATGTCGTTGTTCAAAACCCATCTCTTAAAT
CTGGCAAAGCTCGCGCAGACACATTTTTTGGACCTGGGACAGTGGAAACT
ATCAAATGCCACATAAATGGGGCAGAGTCTAAGGGCGAATTGGATGCCAT
TTTTGTCAATGCTATTCTTTCTGGAATTCAGCAAAGGAATTTGGAGAGAG
CTTGGGGAAAACCTGTATTAGATCGTGTGGGCCTTATAATAGAGATATTT
AATGCTCATGCCCATACAAAAGAGGCAAAGCTACAGGCTGAATTAGCAGC
CCTTATGTATAAGAAGAGTAGACTGGTTCGAGTACGTGGCCCGGATGGCC
GCCTGACTTTTGGGGAAACTGGTGAAGCTGAAGTTGTTAGTGCCCGAGGG
AGAGGAAGTGGGGGACGTGGTTTCATCAGTGGTGCTGGAGAAACTGAACT
TCAACTTCAACGGCGAAGAATTTTAGAACGGCGGAGTCATTTGTTATCCC
AAATTGAAGAGGTTCGTCGTACTCGAGCTGTGCAACGGGCTGCTCGTAGG
AGACATGGTGGATCAGATGGTCGTGGTTTAGCCACTGTTGCTGTTGTAGG
GTACACAAATGCTGGAAAATCTACATTAGTTGGTGCGCTCTCTGATAGTG
ATCTATT
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