CB290599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.375e-30 Identity = 73/133 (54.89%), Postives = 91/133 (68.42%), Query Frame = -3 Query: 371 RSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIRXXXXXXXXXXES--VRRYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 751 RSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV++ LEQNTLVIR S RR+ +RI+LPEK+Y+TD+IKAEMKNGVL ER ++ + VD Sbjct: 78 RSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD 210
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.852e-28 Identity = 71/135 (52.59%), Postives = 86/135 (63.70%), Query Frame = -3 Query: 371 RSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIR----XXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 751 RS+SQVLN MDQ ENP S TRG G RRGWD KE DDAL L IDMPGL +EDV++ LEQ+TLVIR RR+ +RI LP+K+Y+ D+IKAEMKNGVL ER DV Q++++ Sbjct: 76 RSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEIN 210
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.852e-28 Identity = 71/129 (55.04%), Postives = 86/129 (66.67%), Query Frame = -3 Query: 371 RSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIR--XXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 751 RSLSQVLN +D +T+NP S RRGWDA+ET+DAL L +DMPGLGKEDV++ +EQNTL I+ +S RR+ +RIDLPEKLY+ D IKAEMKNGVL ER +V VKVD Sbjct: 77 RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = -3 Query: 371 RSLSQVLNFMDQMTENPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIRXXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 751 RS+ Q++N MDQ+ ENPF + +RG +RRGWD +E ++AL L +DMPGL KEDV+V +E NTL+I+ E RRY +RI+L LY+ D IKAEMKNGVL E+ DVFQV VD Sbjct: 75 RSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVMVD 204
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = -3 Query: 371 RGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIRXXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 670 RGWDA+ET+DAL+L +DMPGL KEDV++ +EQNTL+I+ ES RRY +RIDLP+KLY+ DQI+AEMKNGVL ER DV VKV+ Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = -3 Query: 371 RSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIRXXXXXXXXXXESV--RRYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 751 +SL ++L+ MD + P LRRGW+AKE+++AL+L +DMPGLGKE V+V+ EQN+LVI+ E RY RI+L ++YR DQIKAEMKNGVL +R DVFQV V+ Sbjct: 93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVFQVNVE 220
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.219e-17 Identity = 59/135 (43.70%), Postives = 73/135 (54.07%), Query Frame = -3 Query: 371 SLSQVLNFM-DQMTENPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIRXXXXXXXXXXESVR--RYPTRIDLPEKLYRTDQIKAEMKNGVLXXXXXXXXXXERADVFQVKVD 748 SL ++L M D GT G RRG W AKE DDA++L + MPGLGKE V+V+ EQN+LVI+ RY RI+LP ++ D+IKAEMKNGVL ER DVFQV V+ Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVFQVNVE 248
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = -3 Query: 434 RSLSQVLNFMDQMTEN--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVI----RXXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVL 751 R++ Q+L+ MD+M E+ P RGG +R WD KE + + + DMPGL KEDV++ +E N LVI + SV Y TR+ LP+ + D+IKAE+KNGVL Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVL 208
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11 Identity = 40/116 (34.48%), Postives = 68/116 (58.62%), Query Frame = -3 Query: 434 RSLSQVLNFMDQMTENPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVI-----RXXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVL 751 R++ Q+++ MD++ E+ F G+R G +R WD K+ ++ + + DMPGL KE+V+V +E + LVI + + Y TR+ LP+ + + D++KAE+KNGVL Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVL 222
BLAST of CB290599 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = -3 Query: 434 RSLSQVLNFMDQMTENPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVFLEQNTLVIR-------XXXXXXXXXXESVRRYPTRIDLPEKLYRTDQIKAEMKNGVL 751 RS+ Q+L+ MD++ E+ F G G +R WD K+ + + + DMPGL KEDV+V +E + LVI+ + Y TR+ LP+ + D++KAE+KNGVL Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVL 162 The following BLAST results are available for this feature:
BLAST of CB290599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290599 ID=CB290599; Name=CB290599; organism=Citrus sinensis; type=EST; length=753bpback to top |