CB290646 | Citrus Genome Database

Overview


Name	CB290646
Unique Name	CB290646
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	870

Libraries


Library Name	Type
Washington Navel orange cold acclimated flavedo & albedo cDNA library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP2_CYPCA (Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.212e-60
Identity = 121/255 (47.45%), Postives = 161/255 (63.14%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQ--KKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDS--AYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q   K     G    KY+G+ GT++T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G + VG   +  +++AG TTGA+ + +A PTD+VKVR QA+     G  +RY G ++AY TI K+EGF  LW G GPN+ RNAI+N  EL +YD +K  +LK    TD++  H  S  GAGF    I SPVDVVK+R M  +   Y S L+C +  L  +GP AFYKGF+P+
Sbjct:   28 DLFTFPLDTAKVRLQIQGESKIPVNTGHGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHVG---IGSRLMAGCTTGAMAVALAQPTDVVKVRFQAQNSA--GANKRYHGTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDALLKSSLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAPGQYCSALNCAVAMLTKEGPKAFYKGFMPS 277

HSP 2 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 53/178 (29.78%), Postives = 81/178 (45.51%), Query Frame = 2

Query:  374 GDVP--LSKKILAGLTTGALGIMIANPTDLVKVRLQAEG--KLPPGV---PRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDSA------YKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            GDVP   + K +   T   +  +   P D  KVRLQ +G  K+P      P +Y G     ST+V+ EG  +L++G+   + R     +  +  YD VKQ   K       + + L++G   G +AV +  P DVVK R    ++      Y  T+D +    K +G    +KG  PN
Sbjct:    7 GDVPPTATVKFIGAGTAACIADLFTFPLDTAKVRLQIQGESKIPVNTGHGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHV-GIGSRLMAGCTTGAMAVALAQPTDVVKVRFQAQNSAGANKRYHGTMDAYRTIAKEEGFRGLWKGTGPN 183

HSP 3 Score: 73.1738 bits (178), Expect = 2.191e-12
Identity = 50/176 (28.41%), Postives = 76/176 (43.18%), Query Frame = 2

Query:  134 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIL 661
            P D  KVR Q Q  A A       +Y G +    TIA+EEG   LWKG  P + R  +     +  Y+ +K   +    + D  L     +    G    +IA+P D+VK R           P +Y  ALN    ++ +EG  A + G  P+  R    N     +Y+Q+K+ ++
Sbjct:  137 PTDVVKVRFQAQNSAGANK-----RYHGTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDALLKSSLMTD-DLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA------PGQYCSALNCAVAMLTKEGPKAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAMM 300

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BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.389e-59
Identity = 122/254 (48.03%), Postives = 161/254 (63.39%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQ-KKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDS--AYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G+LGT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +  G   +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   + AY TI ++EGF  LW G  PNVARNAI+N AEL +YD +K T+LK    TD++  H  S  GAGF    I SPVDVVK+R M  +   Y S   C +  L+ +GP AFYKGF+P+
Sbjct:   28 DLITFPLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA--GAGRRYQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYSSAGHCALTMLQKEGPQAFYKGFMPS 276

HSP 2 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 2

Query:  377 DVP--LSKKILAGLTTGALGIMIANPTDLVKVRLQAEGK----LPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDS------AYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            DVP   + K L   T   +  +I  P D  KVRLQ +G+    +      +Y G L    T+V+ EG  +L++G+   + R     +  +  YD VKQ   K       + + LL+G   G +AV +  P DVVK R    +       Y+ST++ +    + +G    +KG  PN
Sbjct:    8 DVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHA-GIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGAGRRYQSTVEAYKTIAREEGFRGLWKGTSPN 182

HSP 3 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 52/177 (29.38%), Postives = 80/177 (45.20%), Query Frame = 2

Query:  134 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVK-TLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIL 661
            P D  KVR Q Q +A AG      +Y+  +    TIAREEG   LWKG  P + R  +     +  Y+ +K TL        D+P      +    G    +IA+P D+VK R             +YS A +   T++++EG  A + G  P+  R    N     +Y+Q+K+ ++
Sbjct:  136 PTDVVKVRFQAQARAGAGR-----RYQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAHLMTDDLPCH--FTSAFGAGFCTTVIASPVDVVKTRYMNSAL------GQYSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 299

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP3_RAT (Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.075e-59
Identity = 119/252 (47.22%), Postives = 160/252 (63.49%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMG--DSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q +     GV   +Y+G+LGT+ T+ R EG  S + G+V GLHRQ  F  +RIGLY+ VK  Y  K       ++ +ILAG TTGA+ +  A PTD+VKVR QA  +L  G  R+Y G ++AY TI ++EG   LW G  PN+ RNAI+N AE+ +YD +K+ +L    FTDN   H +S  GAGF A  + SPVDVVK+R M      Y+S L C +  +  +GP AFYKGF+P+
Sbjct:   28 DLLTFPLDTAKVRLQIQGE---NPGVQSVQYRGVLGTILTMVRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKG-TDHSSVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPPGRYRSPLHCMLRMVAQEGPTAFYKGFMPS 275

HSP 2 Score: 78.9518 bits (193), Expect = 3.993e-14
Identity = 54/182 (29.67%), Postives = 82/182 (45.05%), Query Frame = 2

Query:  125 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKD-FVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKI 667
            C  P D  KVR Q   +   G      KY+G +    TIAREEG+  LWKG  P + R  +     +  Y+ +K   +    F  + P     ++    G    ++A+P D+VK R       PPG   RY   L+    +V QEG  A + G  P+  R    N     +Y+Q+K+ ++K+
Sbjct:  130 CAQPTDVVKVRFQAMIRLGTGGE---RKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLDSHLFTDNFPCH--FVSAFGAGFCATVVASPVDVVKTRYM---NAPPG---RYRSPLHCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKRALMKV 300

HSP 3 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 50/168 (29.76%), Postives = 75/168 (44.64%), Query Frame = 2

Query:  395 KILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTD--NVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM--------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            K L   T      ++  P D  KVRLQ +G+ P     +Y G L    T+V+ EG  + ++G+   + R     +  +  YD VKQ     P  TD  +V   +L+G   G +AV    P DVVK R          G+  Y+ T+D +    + +G    +KG  PN
Sbjct:   16 KFLGAGTAACFADLLTFPLDTAKVRLQIQGENPGVQSVQYRGVLGTILTMVRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQ--FYTPKGTDHSSVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPN 181

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP2_DANRE (Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.952e-59
Identity = 119/255 (46.67%), Postives = 160/255 (62.75%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQ--KKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDS--AYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q   KA    G    KY+G+ GT++T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G D  G   +  +++AG TTGA+ + +A PTD++KVR QA+  +  G  +RY   ++AY TI K+EGF  LW G GPN+ RNAI+N  EL +YD +K  +LK    TD++  H  S  GAGF    I SPVDVVK+R M  +   Y S L+C +  L   GP AF+KGF+P+
Sbjct:   28 DLFTFPLDTAKVRLQIQGENKASTNMGRGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSDHAG---IGSRLMAGCTTGAMAVAVAQPTDVLKVRFQAQ--VSAGASKRYHSTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDALLKSSLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMNSAQGQYSSALNCAVAMLTKKGPKAFFKGFMPS 277

HSP 2 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 51/178 (28.65%), Postives = 78/178 (43.82%), Query Frame = 2

Query:  374 GDVP--LSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGV-----PRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            GDVP   + K +   T   +  +   P D  KVRLQ +G+          P +Y G     ST+V+ EG  +L++G+   + R     +  +  YD VKQ   K       + + L++G   G +AV +  P DV+K R            Y ST+D +    K +G    +KG  PN
Sbjct:    7 GDVPPTATVKFIGAGTAACIADLFTFPLDTAKVRLQIQGENKASTNMGRGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSDHA-GIGSRLMAGCTTGAMAVAVAQPTDVLKVRFQAQVSAGASKRYHSTMDAYRTIAKEEGFRGLWKGTGPN 183

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP3_CANFA (Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.079e-59
Identity = 119/252 (47.22%), Postives = 157/252 (62.30%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGD--SAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q +  A       +Y+G+LGT+ T+ R EG  S + G+V GL RQ  F  +RIGLY+ VK  Y  K       ++ +ILAG TTGA+ +  A PTD+VKVR QA   L  G  R+YSG ++AY TI ++EG   LW G  PN+ RNAI+N AE+ +YD +K+ +L     TDN   HL+S  GAGF A  + SPVDVVK+R M      Y S LDC +  +  +GP AFYKGF P+
Sbjct:   28 DLLTFPLDTAKVRLQIQGENQATQAARRIQYRGVLGTILTMVRTEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGS-DHSSITTRILAGCTTGAMAVSCAQPTDVVKVRFQASIHLGAGSNRKYSGTMDAYRTIAREEGVRGLWKGTLPNITRNAIVNCAEMVTYDIIKEKLLDYHLLTDNFPCHLISAFGAGFCATVVASPVDVVKTRYMNSPPGQYCSPLDCMLKMVTQEGPTAFYKGFTPS 278

HSP 2 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 53/181 (29.28%), Postives = 82/181 (45.30%), Query Frame = 2

Query:  125 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKI 667
            C  P D  KVR Q      AG      KY G +    TIAREEG+  LWKG +P + R  +     +  Y+ +K   +    + D      +++    G    ++A+P D+VK R       PPG   +Y   L+    +V QEG  A + G  P+  R    N     +Y+Q+K+ ++K+
Sbjct:  133 CAQPTDVVKVRFQASIHLGAGSN---RKYSGTMDAYRTIAREEGVRGLWKGTLPNITRNAIVNCAEMVTYDIIKEKLLDYHLLTD-NFPCHLISAFGAGFCATVVASPVDVVKTRYMNS---PPG---QYCSPLDCMLKMVTQEGPTAFYKGFTPSFLRLGTWNVVMFVTYEQLKRALMKV 303

HSP 3 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 47/169 (27.81%), Postives = 70/169 (41.42%), Query Frame = 2

Query:  395 KILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRR---YSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM--------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            K L   T      ++  P D  KVRLQ +G+       R   Y G L    T+V+ EG  + + G+   + R     +  +  YD VKQ          ++ T +L+G   G +AV    P DVVK R           +  Y  T+D +    + +G    +KG LPN
Sbjct:   16 KFLGAGTAACFADLLTFPLDTAKVRLQIQGENQATQAARRIQYRGVLGTILTMVRTEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSITTRILAGCTTGAMAVSCAQPTDVVKVRFQASIHLGAGSNRKYSGTMDAYRTIAREEGVRGLWKGTLPN 184

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP3_MOUSE (Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.186e-58
Identity = 118/252 (46.83%), Postives = 160/252 (63.49%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGD--SAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q +      V   +Y+G+LGT+ T+ R EG  S + G+V GLHRQ  F  +RIGLY+ VK  Y  K       ++ +ILAG TTGA+ +  A PTD+VKVR QA  +L  G  R+Y G ++AY TI ++EG   LW G  PN+ RNAI+N AE+ +YD +K+ +L+   FTDN   H +S  GAGF A  + SPVDVVK+R M      Y+S L C +  +  +GP AFYKGF+P+
Sbjct:   28 DLLTFPLDTAKVRLQIQGENPGAQSV---QYRGVLGTILTMVRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKG-ADHSSVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLESHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPLGRYRSPLHCMLKMVAQEGPTAFYKGFVPS 275

HSP 2 Score: 75.485 bits (184), Expect = 4.415e-13
Identity = 54/182 (29.67%), Postives = 81/182 (44.51%), Query Frame = 2

Query:  125 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKT-LYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKI 667
            C  P D  KVR Q   +   G      KY+G +    TIAREEG+  LWKG  P + R  +     +  Y+ +K  L     F  + P     ++    G    ++A+P D+VK R       P G   RY   L+    +V QEG  A + G  P+  R    N     +Y+Q+K+ ++K+
Sbjct:  130 CAQPTDVVKVRFQAMIRLGTGGE---RKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLESHLFTDNFPCH--FVSAFGAGFCATVVASPVDVVKTRYM---NAPLG---RYRSPLHCMLKMVAQEGPTAFYKGFVPSFLRLGAWNVMMFVTYEQLKRALMKV 300

HSP 3 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 47/166 (28.31%), Postives = 72/166 (43.37%), Query Frame = 2

Query:  395 KILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM--------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            K L   T      ++  P D  KVRLQ +G+ P     +Y G L    T+V+ EG  + ++G+   + R     +  +  YD VKQ          +V   +L+G   G +AV    P DVVK R          G+  Y+ T+D +    + +G    +KG  PN
Sbjct:   16 KFLGAGTAACFADLLTFPLDTAKVRLQIQGENPGAQSVQYRGVLGTILTMVRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKGADHSSVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPN 181

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP3_HUMAN (Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.023e-58
Identity = 121/253 (47.83%), Postives = 159/253 (62.85%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPG-VPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGD--SAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q +  A     L +Y+G+LGT+ T+ R EG  S + G+V GL RQ  F  +RIGLY+ VK +Y  K    +  L+ +ILAG TTGA+ +  A PTD+VKVR QA   L P    R+YSG ++AY TI ++EG   LW G  PN+ RNAI+N AE+ +YD +K+ +L     TDN   H +S  GAGF A  + SPVDVVK+R M      Y S LDC I  +  +GP AFYKGF P+
Sbjct:   28 DLVTFPLDTAKVRLQIQGENQAVQTARLVQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKG-ADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPS 279

HSP 2 Score: 76.6406 bits (187), Expect = 1.982e-13
Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 2

Query:  125 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKI 667
            C  P D  KVR Q       G   +  KY G +    TIAREEG+  LWKG +P + R  +     +  Y+ +K   +    + D       ++    G    ++A+P D+VK R       PPG   +Y   L+    +V QEG  A + G  P+  R    N     +Y+Q+K+ ++K+
Sbjct:  133 CAQPTDVVKVRFQASIHL--GPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTD-NFPCHFVSAFGAGFCATVVASPVDVVKTRYMNS---PPG---QYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALMKV 304

HSP 3 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 51/178 (28.65%), Postives = 75/178 (42.13%), Query Frame = 2

Query:  377 DVP--LSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRR---YSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM---------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            DVP  ++ K L   T      ++  P D  KVRLQ +G+       R   Y G L    T+V+ EG  + + G+   + R     +  +  YD VKQ          ++ T +L+G   G +AV    P DVVK R            D  Y  T+D +    + +G    +KG LPN
Sbjct:    8 DVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRGVLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLPN 185

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.642e-58
Identity = 120/254 (47.24%), Postives = 160/254 (62.99%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQKKAVAG-DGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDS--AYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G++GT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +      +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   +NAY TI ++EGF  LW G  PNVARNAI+N AEL +YD +K  +LK    TD++  H  S  GAGF    I SPVDVVK+R M  +   Y S   C +  L+ +GP AFYKGF+P+
Sbjct:   28 DLITFPLDTAKVRLQIQGESQGPVHATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAS---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPS 276

HSP 2 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 2

Query:  377 DVP--LSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGV----PRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            DVP   + K L   T   +  +I  P D  KVRLQ +G+    V      +Y G +    T+V+ EG  +L+ G+   + R     +  +  YD VKQ   K      ++ + LL+G   G +AV +  P DVVK R        G   Y+ST++ +    + +G    +KG  PN
Sbjct:    8 DVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVHATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHA-SIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPN 182

HSP 3 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 49/176 (27.84%), Postives = 79/176 (44.89%), Query Frame = 2

Query:  134 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIL 661
            P D  KVR Q Q +A  G      +Y+  +    TIAREEG   LWKG  P + R  +     +  Y+ +K   +  + + D  L     +    G    +IA+P D+VK R             +YS A +   T++++EG  A + G  P+  R    N     +Y+Q+K+ ++
Sbjct:  136 PTDVVKVRFQAQARAGGGR-----RYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTD-DLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL------GQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 299

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP3_PIG (Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.450e-58
Identity = 117/252 (46.43%), Postives = 159/252 (63.10%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGD--SAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q +  A       +Y+G+LGT+ T+ R EG  S + G+V GL RQ  F  +RIGLY+ VK LY  K       ++ +ILAG TTGA+ +  A PTD+VKVR QA     P   R+YSG ++AY TI ++EG   LW G+ PN+ RNAI+N AE+ +YD +K+ +L     TDN+  H +S  GAGF A  + SPVDVVK+R M      Y++ LDC +  +  +GP AFYKGF P+
Sbjct:   28 DLLTFPLDTAKVRLQIQGENQAARSA---QYRGVLGTILTMVRNEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQLYTPKGS-DHSSITTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHAGPRSNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCAEMVTYDVIKEKVLDYHLLTDNLPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPGQYQNPLDCMLKMVTQEGPTAFYKGFTPS 275

HSP 2 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 55/181 (30.39%), Postives = 82/181 (45.30%), Query Frame = 2

Query:  125 CTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKI 667
            C  P D  KVR Q    A         KY G +    TIAREEG+  LWKGI+P + R  +     +  Y+ +K   +    + D  L    ++    G    ++A+P D+VK R       PPG   +Y   L+    +V QEG  A + G  P+  R    N     SY+Q+K+ ++K+
Sbjct:  130 CAQPTDVVKVRFQASIHAGPRSN---RKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCAEMVTYDVIKEKVLDYHLLTD-NLPCHFVSAFGAGFCATVVASPVDVVKTRYMNS---PPG---QYQNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLKRALMKV 300

HSP 3 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 46/166 (27.71%), Postives = 71/166 (42.77%), Query Frame = 2

Query:  395 KILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM--------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            K+L   T      ++  P D  KVRLQ +G+       +Y G L    T+V+ EG  + + G+   + R     +  +  YD VKQ          ++ T +L+G   G +AV    P DVVK R           +  Y  T+D +    + +G    +KG LPN
Sbjct:   16 KLLGAGTAACFADLLTFPLDTAKVRLQIQGENQAARSAQYRGVLGTILTMVRNEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQLYTPKGSDHSSITTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHAGPRSNRKYSGTMDAYRTIAREEGVRGLWKGILPN 181

[Close]

BLAST of CB290646 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.450e-58
Identity = 121/254 (47.64%), Postives = 160/254 (62.99%), Query Frame = 2

Query:  119 EICTIPLDTAKVRLQLQ-KKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMMGDS--AYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            ++ T PLDTAKVRLQ+Q ++       A  +Y+G+LGT+ T+ R EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y  G +  G   +  ++LAG TTGAL + +A PTD+VKVR QA+ +   G  RRY   ++AY TI ++EG   LW G  PNVARNAI+N AEL +YD +K T+LK    TD++  H  S  GAGF    I SPVDVVK+R M  +   Y S   C +  L+ +GP AFYKGF P+
Sbjct:   28 DLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAPGQYSSAGHCALTMLQKEGPRAFYKGFTPS 276

HSP 2 Score: 76.6406 bits (187), Expect = 1.982e-13
Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 2

Query:  134 PLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIL 661
            P D  KVR Q Q +A  G      +Y+  +    TIAREEG+  LWKG  P + R  +     +  Y+ +K   +  D + D  L     +    G    +IA+P D+VK R           P +YS A +   T++++EG  A + G  P+  R    N     +Y+Q+K+ ++
Sbjct:  136 PTDVVKVRFQAQARAGGGR-----RYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKADLMTD-DLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA------PGQYSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALM 299

HSP 3 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 49/168 (29.17%), Postives = 74/168 (44.05%), Query Frame = 2

Query:  395 KILAGLTTGALGIMIANPTDLVKVRLQAEGK----LPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVKSRMM------GDSAYKSTLDCFIXTLKNDGPLAFYKGFLPN 868
            K L   T   +  +I  P D  KVRLQ +G+    +      +Y G L    T+V+ EG  +L+ G+   + R     +  +  YD VK    K       + + LL+G   G +AV +  P DVVK R        G   Y+ST+D +    + +G    +KG  PN
Sbjct:   16 KFLGAGTAACIADLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTKGSEHA-GIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLRGLWKGTSPN 182

The following BLAST results are available for this feature:

BLAST of CB290646 vs. ExPASy Swiss-Prot

BLAST of CB290646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216


Match Name	E-value	Identity	Description
UCP2_CYPCA	8.212e-60	47.45	Mitochondrial uncoupling protein 2 OS=Cyprinus car...	[more]
UCP2_BOVIN	2.389e-59	48.03	Mitochondrial uncoupling protein 2 OS=Bos taurus G...	[more]
UCP3_RAT	4.075e-59	47.22	Mitochondrial uncoupling protein 3 OS=Rattus norve...	[more]
UCP2_DANRE	6.952e-59	46.67	Mitochondrial uncoupling protein 2 OS=Danio rerio ...	[more]
UCP3_CANFA	9.079e-59	47.22	Mitochondrial uncoupling protein 3 OS=Canis famili...	[more]
UCP3_MOUSE	1.186e-58	46.83	Mitochondrial uncoupling protein 3 OS=Mus musculus...	[more]
UCP3_HUMAN	2.023e-58	47.83	Mitochondrial uncoupling protein 3 OS=Homo sapiens...	[more]
UCP2_PONAB	2.642e-58	47.24	Mitochondrial uncoupling protein 2 OS=Pongo abelii...	[more]
UCP3_PIG	3.450e-58	46.43	Mitochondrial uncoupling protein 3 OS=Sus scrofa G...	[more]
UCP2_PIG	3.450e-58	47.64	Mitochondrial uncoupling protein 2 OS=Sus scrofa G...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS01_01cg04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cg04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB290646 ID=CB290646; Name=CB290646; organism=Citrus sinensis; type=EST; length=870bp
GCGCTATAAAGATTACCCTCGTTTCTTTGCCATAAACATGGTGGCCGATT
CCAAGGCTAAATCTGACATCTCTTTCGCCGGAACCTTCGCCAGTAGCGCT
TTTGCCGCTTGCTTTGCCGAGATTTGTACTATTCCTTTGGACACTGCTAA
AGTTAGGCTTCAGCTGCAAAAGAAAGCTGTCGCGGGGGATGGAGTGGCGT
TGCCAAAGTACAAGGGTATGTTGGGTACAGTTGCCACCATAGCTAGGGAA
GAAGGTATGGTGTCTCTCTGGAAAGGCATTGTTCCAGGATTACATCGTCA
ATGCTTATTTGGAGGGTTAAGGATTGGATTGTATGAGCCTGTGAAGACAC
TGTATGTGGGCAAGGACTTTGTTGGAGACGTTCCTTTAAGCAAGAAAATA
CTTGCAGGACTTACAACTGGTGCTCTCGGGATCATGATCGCAAATCCAAC
TGATCTTGTGAAGGTCAGACTTCAAGCTGAAGGAAAATTGCCTCCTGGTG
TACCGAGGCGCTACAGTGGAGCGTTGAATGCTTATTCCACAATTGTGAAA
CAGGAAGGATTTGCGGCTCTTTGGACTGGAGTTGGACCCAATGTTGCACG
AAATGCTATCATAAATGCTGCTGAACTGGCTAGCTATGATCAAGTGAAGC
AGACAATTTTGAAAATTCCAGGGTTCACAGATAACGTCGTCACTCATCTC
CTTTCTGGTCTGGGAGCTGGTTTTGTCGCTGTTTGTATTGGTTCCCCTGT
TGATGTGGTTAAGTCGAGGATGATGGGGGATTCTGCTTATAAGAGCACAC
TGGATTGTTTCATTANGACTCTGAAGAATGATGGGCCGTTGGCATTTTAT
AAGGGTTTCCTACCAAACTT