CB290658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 3.721e-94 Identity = 169/241 (70.12%), Postives = 199/241 (82.57%), Query Frame = 1 Query: 139 MAQIQVQHQ------AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 MAQ+Q+Q Q A ++ + GA+ QF TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ESAQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF NV+VKNLAESTTD+DLK FGEYG I Sbjct: 1 MAQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKI 241 HSP 2 Score: 146.747 bits (369), Expect = 1.487e-34 Identity = 81/221 (36.65%), Postives = 126/221 (57.01%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET------------VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ L+D FS G ++S +V D S+ +S GYG+V YAN A +A++ LN LN+K + + RD + K+ N+++KNL +S L + F +G I S + DG G+SKGFGFV FEN + A A++ LNG +DK+ +VG +K ERET A K + +N++VKNL S +DE LK+ F +GT+ Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTV 344 HSP 3 Score: 109.768 bits (273), Expect = 2.015e-23 Identity = 68/206 (33.01%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 202 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNV 771 ++ N+ T++YV +L + TD L + F + G++ S V +D +S G+G+VN+ N DAARA++ LN ++K + S R+ +R K + N+++KNLD SI + L + FS FG + S K+ D +G SKG GFV F E A A+ +L+G +I K ++V RK++R V ++ +F+ V Sbjct: 207 STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR-VRLQAQFSQV 410
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 1.987e-71 Identity = 141/225 (62.67%), Postives = 178/225 (79.11%), Query Frame = 1 Query: 190 VAAGASGNQFLTT----SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 VAA A+ + L T SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+SKG+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+ + F NV+VKNL + TD++LKK FG+YG I Sbjct: 29 VAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYGDI 251 HSP 2 Score: 131.339 bits (329), Expect = 6.467e-30 Identity = 75/224 (33.48%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKF-------------NNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LY+ FS G +LS +V D+ RS GYG+V + A A+D LN LN+K + + + R +S +G N+++KNL K I L TF +G+I S + D SG S+ FGFV F + E+A A++K+NG+ + + ++VG +K +RE ++ KF +N+++KNL +S DE LK+ F EYG + Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE-ELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNV 354 HSP 3 Score: 104.76 bits (260), Expect = 6.482e-22 Identity = 61/187 (32.62%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 T++YV +L +TD +L F + G + S V +D S S +G+VN+ +P AA A++ +N L + + S R+ +R K N+++KNLD S++ + L + FS +GN+ SCK+ + G S+GFGFV + N E A A+ ++NG +I K ++V RK+ER+ Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQ 410
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.860e-69 Identity = 137/236 (58.05%), Postives = 174/236 (73.73%), Query Frame = 1 Query: 142 AQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQE--RETVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 AQ VQ + P+ V + +SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QE R+ +F NV+VKNL + +++L+K FG++G I Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHP--NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI 255 HSP 2 Score: 133.65 bits (335), Expect = 1.303e-30 Identity = 79/224 (35.27%), Postives = 121/224 (54.02%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS------IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + L++ FS G +LS +V D+ T RS GYG+V + A A+D LN +N+K IR RD + N+++KNL K I L TF FG I S + D SG S+ FGFV FE E+A +A++K+NG+ + D ++VG +K ERE ++ KF N+++KNL +S DE LK+ F EYG + Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREE-ELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNV 358 HSP 3 Score: 96.2857 bits (238), Expect = 2.305e-19 Identity = 58/186 (31.18%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 226 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 735 T++YV +L + + +L F + G + S V RD S S +G+VN+ AA A++ +N L + + + S R+ +R KS N+++KNLD S+D + L + FS +GN+ S K+ + G S+GFGFV + N E A A+ ++NG +I K +++ RK++R Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDR 413
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 5.411e-69 Identity = 125/219 (57.08%), Postives = 167/219 (76.26%), Query Frame = 1 Query: 193 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 +A S NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KN+ + TDE+ +K F ++G I Sbjct: 41 SATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI 259 HSP 2 Score: 120.939 bits (302), Expect = 8.740e-27 Identity = 71/223 (31.84%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F +SAQ A+D++N I ++++VG +K ERE A K + N++VKNL + DE L++ F +GTI Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTI 362
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 7.067e-69 Identity = 128/213 (60.09%), Postives = 163/213 (76.53%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK++FG+YG Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYG 215 HSP 2 Score: 132.88 bits (333), Expect = 2.223e-30 Identity = 79/224 (35.27%), Postives = 123/224 (54.91%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA+D +N LN++ + + R+ + R N++IKN + +D + L + F +G LS K+ TD G+S+GFGFV FE E AQ A+D +NG +N K +FVG +K ER+T +K KF N++VKNL + DE L+K F +G+I Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSI 320 HSP 3 Score: 105.531 bits (262), Expect = 3.800e-22 Identity = 66/197 (33.50%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L + F Q G LSV+V D +S G+G+V++ DA +A+D +N LN K+I + + + D R G N+++KNLD ID + L F+ FG+I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 259.225 bits (661), Expect = 2.056e-68 Identity = 128/207 (61.84%), Postives = 161/207 (77.78%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE-TVAIKTK-FNNVFVKNLAESTTDEDLKKFFGEYGTI 843 SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+ATD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F NV+VKN E DE LK+FF YG I Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI 209 HSP 2 Score: 107.457 bits (267), Expect = 1.000e-22 Identity = 69/225 (30.67%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + +YD FS G +LS +V D S GYG+V++ A ++D +N LN K + + + R ++ G N+++KN + D + L + F +G I S K+ + G+SKGFGFV FE E+A+ A+ LNG + + K ++V +K ER+ +K KF N++VKNL ++ D+ L+ F YG I Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQ-ELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNI 313 HSP 3 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 57/190 (30.00%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 220 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNN----------------KSIRIMYSHRDPSIRKSGTG-NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 L T++YV + + D +L + F G++ S +V +S G+G+V + A A+ LN + + ++ + +S G N+++KNLD +ID L FS +GNI S K+ TD G+SKGFGFV F A A+ +LNG ++ K ++V RK+ER+ Sbjct: 181 LFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSK-EDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERK 369
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.508e-68 Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 S +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KN+ + TDE+ +K F ++G I Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI 259 HSP 2 Score: 120.939 bits (302), Expect = 8.740e-27 Identity = 71/223 (31.84%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F +SAQ A+D++N I ++++VG +K ERE A K + N++VKNL + DE L++ F +GTI Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTI 362
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 258.455 bits (659), Expect = 3.508e-68 Identity = 126/213 (59.15%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AIDK+NGML+ND++VFVG F ++ERE A +F NV++KN + DE LK+ FG+YG Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYG 215 HSP 2 Score: 133.265 bits (334), Expect = 1.702e-30 Identity = 80/224 (35.71%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA+D +N LN++ + + R+ + R N++IKN ++ + L + F +G LS K+ TD +G+SKGFGFV FE E AQ A+D++NG +N K +FVG +K ER+T +K KF N++VKNL + DE L+K F +GTI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTI 320 HSP 3 Score: 104.76 bits (260), Expect = 6.482e-22 Identity = 64/197 (32.49%), Postives = 106/197 (53.81%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L ++F + G LSV+V D +S G+G+V++ DA +A+D +N +N KS+ + + + D R G N+++KNLD ID + L F FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.021e-67 Identity = 121/215 (56.28%), Postives = 164/215 (76.28%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 + NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F N+++KN+ T+E+ +K F ++G I Sbjct: 44 NNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEI 258 HSP 2 Score: 122.479 bits (306), Expect = 3.004e-27 Identity = 72/223 (32.29%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ NI+IKN+D + + F FG I S ++ D G+S+GFGFV + ESAQ A+D+++ + ++++VG +K ERE A K + N++VKNL + DE L++ FG YGTI Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTI 361
BLAST of CB290658 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.021e-67 Identity = 126/213 (59.15%), Postives = 162/213 (76.06%), Query Frame = 1 Query: 205 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLAESTTDEDLKKFFGEYG 837 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F NV++KN E DE LK+ FG++G Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFG 215 HSP 2 Score: 140.198 bits (352), Expect = 1.392e-32 Identity = 82/224 (36.61%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 229 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLAESTTDEDLKKFFGEYGTI 843 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++ +N LN++ + + R+ + R N++IKN + +D + L + F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +K KF N++VKNL + DE L+K F +GTI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT-ELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 320 HSP 3 Score: 108.612 bits (270), Expect = 4.489e-23 Identity = 68/197 (34.52%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 199 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 738 GA +F T++Y+ + ++ D +L +LF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I + + + D R G N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375 The following BLAST results are available for this feature:
BLAST of CB290658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290658 ID=CB290658; Name=CB290658; organism=Citrus sinensis; type=EST; length=845bpback to top |