CB290691
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.412e-65 Identity = 128/224 (57.14%), Postives = 152/224 (67.86%), Query Frame = 3 Query: 51 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASRWYDSVSSHIAPSFPGKAVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 MA+TFSDLHTE G+KS++++L+GK+YISG+QL+ DD+KVYAAV VKP+D+FPNAS+WY+SV+S +A SFPGKAVGV+ VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGASKLVPVGYGIKK+ IM TI+DDLVS D+LIE+ LT EP NEY+QSCDIVAFNKI Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 244.588 bits (623), Expect = 4.549e-64 Identity = 128/224 (57.14%), Postives = 148/224 (66.07%), Query Frame = 3 Query: 51 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASRWYDSVSSHIAPSFPGKAVGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 MA+TF+DLHT GLK+L+Q+LSGK+Y+SGN ++KDDIKV+AAV KP FPNA+RWYD+V++ +A FPGKAVGV VLLDVKPWDDETDMKKLEEAVRSV+M GL WGASKLVPVGYGIKK+QIM+TI+DDLVSVDSLIEEHLT EP NE+VQSCDIVAFNKI Sbjct: 1 MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.600e-38 Identity = 73/87 (83.91%), Postives = 82/87 (94.25%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VL+D+KPWDDETDMKKLEEAVRS++M GLFWGASKLVPVGYGIKK+ IM TI+DDLVS+D++IEE LTVEP NEYVQSCDIVAFNKI Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 7.313e-38 Identity = 72/87 (82.76%), Postives = 83/87 (95.40%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VL+D+KPWDDETDMKKLEEAV+S++M GLFWGASKLVPVGYGIKK+QI+ TI+DDLVS+D++IEE LTVEP NEYVQSCDIVAFNKI Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.779e-37 Identity = 75/87 (86.21%), Postives = 82/87 (94.25%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGASKLVPVGYGIKK+ IMMTI+DDLVSVD+LIE+HLT EP NEY+QS DIVAFNKI Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228 HSP 2 Score: 123.25 bits (308), Expect = 1.528e-27 Identity = 56/77 (72.73%), Postives = 69/77 (89.61%), Query Frame = 3 Query: 51 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASRWYDSVSSHIAPSFPGKAVGVR 281 MA+TFSDLHTE GLK+L+++L+GK+YISG+QL+ DD+KVYAAVL P D FPNAS+WYDSV+SH+A SFPGKA GVR Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVR 77
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKK+QIMMTI+DDLVSVDSLIE++ EP NEY+QSCDIVAFNKI Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.353e-36 Identity = 71/87 (81.61%), Postives = 80/87 (91.95%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VLLDVKPWDDETDM KLEEAVRS++M GL WGASKLV VGYGIKK+QIM+TI+DDLVSVD L+E++LT EP NEY+QSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226 HSP 2 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 51 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASRWYDSVSS 239 MA+TF DL +E+GL+ LD+YL +SYISG Q +KDD+ V+AA+ P+ + N SRWY+ V + Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEA 63
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.073e-36 Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VLLDVKPWDDETDMKKLEEAVRSV+ GL GASKLVPVGYGIKK+ IMMTI+DDLVSVD+LIE++LTVEP NEYVQSCDIVAFNKI Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.073e-36 Identity = 72/87 (82.76%), Postives = 80/87 (91.95%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKK+QIMMTI+DDLVSVDSLIE++ EP NE++QSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226 HSP 2 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 32/68 (47.06%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 51 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASRWYDSVSSHIAPS 254 MAIT S++++E+GL+ LD+YL +SYISG Q +KDD+ V+ ++ PA S+ N +RWYD +S+ + S Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSS 68
BLAST of CB290691 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32 Identity = 69/87 (79.31%), Postives = 75/87 (86.21%), Query Frame = 3 Query: 462 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIIDDLVSVDSLIEEHLTVEPCNEYVQSCDIVAFNKI 722 VL+D+KPWDDETDMKKLEEAVRSV+M GL WGASKL+PVGYGIKK+QIM+TIIDDL S IEE L P NEYVQSCDIVAFNKI Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQSCDIVAFNKI 216 HSP 2 Score: 105.145 bits (261), Expect = 4.307e-22 Identity = 46/76 (60.53%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 51 MAITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPADSFPNASRWYDSVSSHIAPSFPGKAVGV 278 MA+TFSDLHT GLK+L+ +L+GK+YISG+ +TKDD+KV+AAV +KP+ FPNA+RWYD+V++ ++ FPG+A GV Sbjct: 1 MAVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAAAVSSRFPGQASGV 76 The following BLAST results are available for this feature:
BLAST of CB290691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290691 ID=CB290691; Name=CB290691; organism=Citrus sinensis; type=EST; length=770bpback to top |