CB290694

Overview
NameCB290694
Unique NameCB290694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP3_PIG (Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G+ PNI RNAIVN AE+ +YD +KE +L     TDN+  H ++  GAG  A  + SP+DVVK+R M      Y+N +DC +K +  EG  AFYKGF P+F RLGSWNV+MF++ EQ K+  ++
Sbjct:  177 GILPNITRNAIVNCAEMVTYDVIKEKVLDYHLLTDNLPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPGQYQNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLKRALMK 299          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP3_RAT (Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 59/123 (47.97%), Postives = 81/123 (65.85%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMG--DSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  PNI RNAIVN AE+ +YD +KE +L    FTDN   H ++  GAG  A  + SP+DVVK+R M      Y++ + C ++ +  EG  AFYKGF+P+F RLGSWNV+MF+T EQ K+  ++
Sbjct:  177 GTWPNITRNAIVNCAEMVTYDIIKEKLLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPPGRYRSPLHCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKRALMK 299          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP3_MOUSE (Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  PNI RNAIVN AE+ +YD +KE +L+   FTDN   H ++  GAG  A  + SP+DVVK+R M      Y++ + C +K +  EG  AFYKGF+P+F RLG+WNV+MF+T EQ K+  ++
Sbjct:  177 GTWPNITRNAIVNCAEMVTYDIIKEKLLESHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPLGRYRSPLHCMLKMVAQEGPTAFYKGFVPSFLRLGAWNVMMFVTYEQLKRALMK 299          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP2_MOUSE (Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = -3
Query:  326 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS--AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 685
            G  PN+ARNAIVN AEL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVVK+R M  +   Y +   C +  L+ EG  AFYKGF+P+F RLGSWNV+MF+T EQ K+  +
Sbjct:  178 GTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 299          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = -3
Query:  326 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS--AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 685
            G  PN+ARNAIVN AEL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVVK+R M  +   Y +   C +  L+ EG  AFYKGF+P+F RLGSWNV+MF+T EQ K+  +
Sbjct:  178 GTSPNVARNAIVNCAELVTYDLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 299          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP3_CANFA (Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  PNI RNAIVN AE+ +YD +KE +L     TDN   H+++  GAG  A  + SP+DVVK+R M      Y + +DC +K +  EG  AFYKGF P+F RLG+WNV+MF+T EQ K+  ++
Sbjct:  180 GTLPNITRNAIVNCAEMVTYDIIKEKLLDYHLLTDNFPCHLISAFGAGFCATVVASPVDVVKTRYMNSPPGQYCSPLDCMLKMVTQEGPTAFYKGFTPSFLRLGTWNVVMFVTYEQLKRALMK 302          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G+ PNI RNAIVN  E+ +YD +KE +L     TDN   H ++  GAG  A  + SP+DVVK+R M      Y +  DC +K +  EG  AFYKGF P+F RLGSWNV+MF+T EQ K+  ++
Sbjct:  180 GILPNITRNAIVNCGEMVTYDIIKEKLLDYHLLTDNFPCHFVSAFGAGFCATLVASPVDVVKTRYMNSPPGQYHSPFDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQMKRALMK 302          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = -3
Query:  326 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS--AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 685
            G  PN+ARNAIVN AEL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVVK+R M  +   Y +   C +  L+ EG  AFYKGF P+F RLGSWNV+MF+T EQ K+  +
Sbjct:  178 GTSPNVARNAIVNCAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAPGQYSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALM 299          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP3_HUMAN (Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27
Identity = 61/123 (49.59%), Postives = 79/123 (64.23%), Query Frame = -3
Query:  323 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 685
            G  PNI RNAIVN AE+ +YD +KE +L     TDN   H ++  GAG  A  + SP+DVVK+R M      Y + +DC IK +  EG  AFYKGF P+F RLGSWNV+MF+T EQ K+  ++
Sbjct:  181 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALMK 303          
BLAST of CB290694 vs. ExPASy Swiss-Prot
Match: UCP2_RAT (Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = -3
Query:  326 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDS--AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI 685
            G  PN+ARNAIVN  EL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVVK+R M  +   Y +   C +  L+ EG  AFYKGF+P+F RLGSWNV+MF+T EQ K+  +
Sbjct:  178 GTSPNVARNAIVNCTELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 299          
The following BLAST results are available for this feature:
BLAST of CB290694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
UCP3_PIG1.507e-2848.78Mitochondrial uncoupling protein 3 OS=Sus scrofa G... [more]
UCP3_RAT2.176e-2747.97Mitochondrial uncoupling protein 3 OS=Rattus norve... [more]
UCP3_MOUSE2.176e-2747.97Mitochondrial uncoupling protein 3 OS=Mus musculus... [more]
UCP2_MOUSE2.841e-2749.18Mitochondrial uncoupling protein 2 OS=Mus musculus... [more]
UCP2_BOVIN2.841e-2749.18Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]
UCP3_CANFA3.711e-2747.97Mitochondrial uncoupling protein 3 OS=Canis famili... [more]
UCP3_BOVIN4.847e-2747.97Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
UCP2_PIG4.847e-2749.18Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]
UCP3_HUMAN6.330e-2749.59Mitochondrial uncoupling protein 3 OS=Homo sapiens... [more]
UCP2_RAT8.267e-2748.36Mitochondrial uncoupling protein 2 OS=Rattus norve... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01da06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01da06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290694 ID=CB290694; Name=CB290694; organism=Citrus sinensis; type=EST; length=696bp
TTTTTTTTTTTTTTTTTGAACATGAAAGCAATATTTGTTGAAGGCTCAGA
AAATGTGTTTTACATCATTCAGAATACAGTGTAGCATTGTATCAAATATC
AAATAACATGGAGAAGAACTACCTTGTAGTCTTACCCCTGATAAATCTAA
TTTCAAGTCCAATGAATAGTCACAAAGATACTATTCCCTCTCTATAAATG
GCAGTGGAAAGTAATATGTGCAGAGCCAACTTTCTCTCTTCAGGAAAACT
ATAATTTTGTGGGACTATCAAGCAAAAGCTGCTAGTTCCGCTTGTAAAAC
TCAATCAGTCAAAATACACTTCCCTGATGAAAACTTTCTTTGCTTGCTCA
AGGGTCAGAAACATGATCACATTCCAAGATCCCAGTCGGCTAAAATTTGG
TAGAAACCCCTTATAGAAGGCCAAGAATCCCTCATACTTCAAGGTCTTGA
TGAAACAATCAACAGTATTTTTGTAGGCTGAATCTCCCATCATTCTAGAT
TTCACCACATCAATGGGAGAACCAATACAGACAGCAAAGAGGCCTGCACC
AAGACCAGCTAGGATATGAGTGAAAATATTGTCCGTGAACCCTGGAATTT
TCAAAATTGTCTCTTTTACTTGATCATAACTGGCTAGTTCAGCAGCATTT
ACAATAGCATTTCGTGCTATATTGGGTCCAAGTCCCGTCCCTCGTG
back to top