CB290702

Overview
NameCB290702
Unique NameCB290702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1D_ARATH (Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.322e-18
Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = -3
Query:  610 FHYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTNSRV 807
            FHYC+SL FD +PDY +LKR+FRDLF REG+ FD+VFDWTILKYQQ+Q T      P SR  N  V
Sbjct:  252 FHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLT-----APPSRALNPAV 312          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.500e-12
Identity = 49/163 (30.06%), Postives = 87/163 (53.37%), Query Frame = -3
Query:  385 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM--------SSDHHFGKHS---MGNASIPS--ASFVLPSTFNR 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+         + ++ + ++ L   R   +R +P   + +L+G  + + S  +     + N + RP + M+    V+ ++        SS    G+     M  + IPS  AS  LPST +R
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGANRAAEDAERERREREERLRHPRNPAARGLPSTASGRLRGTQEVTPSTPLTPTSHTANTSPRPVSGMERERKVSMRLHRGAPVNVSSSDLTGRQETSRMSTSQIPSRVASSGLPSTVHR 415          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1_EIMTE (Casein kinase I OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 27/55 (49.09%), Postives = 43/55 (78.18%), Query Frame = -3
Query:  640 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLL 804
            +YC+SL F+ RPDY +L+RLF+DLF REGY +DF+FDWT L  ++ ++ + + ++
Sbjct:  253 NYCRSLRFEDRPDYSYLRRLFKDLFFREGYQYDFIFDWTFLHAERERERQRRSMV 307          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1_TOXGO (Casein kinase I OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12
Identity = 26/50 (52.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:  655 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKYQQTQKTK 804
            +YC+SL F+ RPDY +L+RLF+DLF REGY +DF+FDWT +  ++ + ++
Sbjct:  253 NYCRSLRFEDRPDYAYLRRLFKDLFFREGYQYDFIFDWTFINTEKDRASR 302          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12
Identity = 49/163 (30.06%), Postives = 84/163 (51.53%), Query Frame = -3
Query:  385 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQ---------HRPSVAEKMSSD--HHFGKHSMGNASIPS--ASFVLPSTFNR 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+         + ++ + ++ L  +R    R +P   + +L+G  + + S  +     + N + RP + M+         HR +     SSD         M  + IPS   S  LPST +R
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAAEDAERERREREERLRHTRNPAVRGLPSTASGRLRGTQEVTPSTPLTPTSHTANTSPRPVSGMERERKVSMRLHRGAPVNVSSSDLTSRQDTSRMSTSQIPSRVTSSGLPSTVHR 415          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11
Identity = 30/80 (37.50%), Postives = 50/80 (62.50%), Query Frame = -3
Query:  565 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTNSRVMPMRTDKLKGVNDAS 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+   +  +  D     R  + R+   R    +G+  AS
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGANRTAEEAD--RERRERDERMRHSRNPAARGIPAAS 330          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1DA_DANRE (Casein kinase I isoform delta-A OS=Danio rerio GN=csnk1da PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.302e-11
Identity = 41/144 (28.47%), Postives = 73/144 (50.69%), Query Frame = -3
Query:  397 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKY------QQTQKTKSQDLLPASRVTNSRVM-PMRTDKLKGVNDASCSAEVL-ECRGSYNRTRPDADMQHRPSVAEKMSSDHHFGKHSMGNASIPSASFVLPS 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+       +  +   ++ +   R+   RVM P  + + +G  + + +  +  +      R R  +   HR +     SSD   G+      S   A   +PS
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGGAREDPERDRRDREERIRQGRIPLPRVMLPTSSGRPRGTQEVAPAPPLTPDSHTGMERERKVSMRLHRGAPVNVSSSD-LTGRQDCSRISTSQAHSRVPS 395          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1D_RAT (Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 35/121 (28.93%), Postives = 69/121 (57.02%), Query Frame = -3
Query:  472 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 35/121 (28.93%), Postives = 69/121 (57.02%), Query Frame = -3
Query:  472 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of CB290702 vs. ExPASy Swiss-Prot
Match: KC1D_MOUSE (Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 35/121 (28.93%), Postives = 69/121 (57.02%), Query Frame = -3
Query:  472 HYCQSLTFDQRPDYGFLKRLFRDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 804
            ++C+SL FD +PDY +L++LFR+LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
The following BLAST results are available for this feature:
BLAST of CB290702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
KC1D_ARATH5.322e-1863.64Casein kinase I isoform delta-like OS=Arabidopsis ... [more]
KC1D_XENTR1.500e-1230.06Casein kinase I isoform delta OS=Xenopus tropicali... [more]
KC1_EIMTE4.364e-1249.09Casein kinase I OS=Eimeria tenella PE=2 SV=1[more]
KC1_TOXGO9.722e-1252.00Casein kinase I OS=Toxoplasma gondii PE=2 SV=1[more]
KC1D_XENLA9.722e-1230.06Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1DB_DANRE4.825e-1137.50Casein kinase I isoform delta-B OS=Danio rerio GN=... [more]
KC1DA_DANRE6.302e-1128.47Casein kinase I isoform delta-A OS=Danio rerio GN=... [more]
KC1D_RAT8.230e-1128.93Casein kinase I isoform delta OS=Rattus norvegicus... [more]
KC1D_PONAB8.230e-1128.93Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
KC1D_MOUSE8.230e-1128.93Casein kinase I isoform delta OS=Mus musculus GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01da10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01da10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290702 ID=CB290702; Name=CB290702; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTTTTTTTTACCAAAAGACTTCTTATCATTGATTAACCTTTA
AATGGAAGAAACACTCTACATATAACCCATTGAATCCATGAAACCACGGT
TTGATGGGCCAGATCATGGCAGCATCCAATCTGCTTGTGCTTGTAGTCAC
CTTATAAAAAATTACATCATATGATCCAGCAAATCTTGCGGCAAAGAATT
CAAGCTAGCCAAACTTCCTGACACTTGCAACATAAATTTTCCAGATTCCT
TCAAAACCTGCAGCTAGTTCAGAAGAAGAAATTCATTGTTACAATGGCAT
CCAACTGCTTGAAGCACCGGTTTTATTCCCATGTCCACGACCAATATTTG
CAGCTTCATCTGGTCCCTCGGGTTTCTGAAAATTTCGATTGAAGGTACTG
GGCAGAACAAATGAAGCAGACGGAATTGATGCATTGCCCATACTATGTTT
CCCAAAATGATGATCAGAACTCATTTTCTCAGCTACTGATGGCCTATGCT
GCATATCTGCATCTGGGCGAGTGCGATTATATGATCCTCTGCACTCCAGA
ACCTCTGCTGAACAAGAAGCGTCATTGACTCCTTTAAGCTTATCAGTGCG
CATTGGCATTACCCGACTGTTAGTCACTCTAGAAGCTGGCAGCAAATCCT
GTGACTTCGTCTTTTGTGTCTGCTGGTACTTGAGAATGGTCCAGTCAAAC
ACAAAATCAAAATCATATCCTTCTCGAGAAAACAAGTCACGGAACAAACG
CTTCAAGAATCCATAATCAGGCCGCTGGTCAAAGGTTAAAGATTGGCAAT
AATGGAAAT
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