CB290717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_VITVI (Histone H3.3 OS=Vitis vinifera PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_PINPS (Histone H3.3 OS=Pinus pinaster PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=2 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
BLAST of CB290717 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58 Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -2 Query: 430 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEASLVGLFEDTNLCAIHAKRVTIMPKDIQ 774 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA LVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 12 TGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126 The following BLAST results are available for this feature:
BLAST of CB290717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290717 ID=CB290717; Name=CB290717; organism=Citrus sinensis; type=EST; length=775bpback to top |