CB290727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.136e-29 Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = -1 Query: 289 EVSMAGSDFCDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 492 + +MAGS FCDSKC +RCSKAG DRCLKYCGICC++C CVPSGTYG+K ECPCYRD KNSKGK KCP Sbjct: 21 QTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.593e-15 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C KC RCSK + C+ +C CC KC CVP+GTYG+K CPCY + K +G PKCP Sbjct: 54 CQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14 Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C +C RCS + C+ +C CC C CVP G YG+K CPCY + K +GKPKCP Sbjct: 38 CKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.649e-12 Identity = 28/59 (47.46%), Postives = 34/59 (57.63%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C S+C RC K C+ +C CC KC CVP G YG+K C CY + K +G PKCP Sbjct: 48 CPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.153e-12 Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C S C RC + R C + CG CC +C+CVP GTYG+ D+C CY L G+ KCP Sbjct: 40 CGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.812e-12 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C +C RCSK+ R CL+ C CC +C+CVP GT G+ CPCY + G+ KCP Sbjct: 41 CGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.673e-12 Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C +C RCSK+ R + CL+ C CC +C+CVP GT G+ CPCY + G+ KCP Sbjct: 41 CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of CB290727 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11 Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = -1 Query: 289 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 465 C CA RC + R C + CG CC +C+CVP GT G+ + CPCY L K KCP Sbjct: 46 CGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104 The following BLAST results are available for this feature:
BLAST of CB290727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290727 ID=CB290727; Name=CB290727; organism=Citrus sinensis; type=EST; length=630bpback to top |