CB290744

Overview
NameCB290744
Unique NameCB290744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290744 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.679e-33
Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = 3
Query:  180 SYLTFSWLKDFNNLCDWYTHLLAKSPTGTIHLHA-LGNT--VTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLS 707
            SYL+F   K+ +    W + ++  SP+ T  L   LG    +T NP  V++ILK +F NY KG  F+  L D LG GIFN +G +WKFQR++AS E  + + + +   +V  E+  RLIP+L+S + + NNILD QD+ +RF+FD+IC  +FG DPE L  +   SKFA A++ A+++S
Sbjct:   56 SYLSFR--KNLHRRIQWLSDIVQISPSATFQLDGTLGKRQIITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTS-STQTNNILDFQDILQRFTFDNICNIAFGYDPEYLTPSTNRSKFAEAYEDATEIS 231          
BLAST of CB290744 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31
Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 3
Query:  192 FSWLKDFNNLCDWYTHLLAKSPTGTIHLH---ALGNTVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLS 707
            FS L +F+    W + +L   P+ T  LH         T+ P  V++IL+T F  Y KG  F   + D LG GIFN DG SWKFQR+I+S E  + + + +   +V  E+  RL+P+LS A+N     LD QD+ +R +FD+IC  +FG DPE L+ +LP   FA AFD +S+LS
Sbjct:   53 FSLLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNS-QTTLDFQDILQRLTFDNICMIAFGYDPEYLLPSLPEIPFAKAFDESSQLS 226          
BLAST of CB290744 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28
Identity = 66/137 (48.18%), Postives = 88/137 (64.23%), Query Frame = 3
Query:  291 TVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASK 701
            TVT +P+NVE+ILKTRFDNYPKG  +     DLLG GIFN DG++W  QRK A++E  +   +      V   I+ RL  +L  A    N  +DLQD+F R +FD+IC  +FG DPE L L+LP + F+ AFD A++
Sbjct:   85 TVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNGTIKNRLWLILDRAVQN-NKPVDLQDLFLRLTFDNICGLTFGKDPETLSLDLPDNPFSVAFDTATE 220          
BLAST of CB290744 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 3
Query:  291 TVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLS 707
            TVT +P+N+E++LKTRFDNYPKG  +  +  D LG GIFN DG++W FQRK A++E  +   +      V   I+ R  P+L +A N    + DLQD+  R +FD+IC  +FG D       LP + FA+AFD A++ S
Sbjct:   82 TVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPV-DLQDLILRLTFDNICGLAFGKDTRTCAPGLPENGFASAFDRATEAS 219          
BLAST of CB290744 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22
Identity = 68/170 (40.00%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  207 DFNNLCDWYTHLLAKSPTGTIHLHALGNTVTSNPENVEYILKTRFDNYPKGKPFSVILGDLLGGGIFNVDGNSWKFQRKIASVELGSFNFKMYAFELVTAEIRFRLIPLLSSAANKVNNILDLQDVFRRFSFDSICKFSFGLDPECLMLNL----PVSKFATAFDLASKL 704
            +F  L D++T    +  T  +         T++P NVE+ILKT F NY KG     I+ DLLG GIFNVDG+ W+ QRK+AS E  S   K ++   V      +L  +L+ AA K+N  +++QD+F R S DSICK  FG+D   L  +     P + FA AFD+A+ +
Sbjct:   49 NFERLHDYHTDQAQRYKTFRVVYPTCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFS-SGVFCNNAAKLANILAQAA-KLNLSVEMQDLFMRSSLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAM 216          
The following BLAST results are available for this feature:
BLAST of CB290744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
C94A1_VICSA4.679e-3342.46Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C94A2_VICSA3.353e-3141.71Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A1_ARATH2.657e-2848.18Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH5.011e-2743.88Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C04C1_PINTA2.845e-2240.00Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290744 ID=CB290744; Name=CB290744; organism=Citrus sinensis; type=EST; length=708bp
TTTTTTTCTTCTCTACTTCTACATCAATGGAGCTATTTGGTTATTGTTCC
TTGTGGTTGCAATCTTTCGGCGACACTTTAAGCTTCATGTTCTTCACTTT
CACAATTTTGTTTTCTTTGTTTTCTTTGTTGATCTTTGTGCTGAGGCTGA
AACCCTGGTGCCAATGTGATGTTTGCCGGAGCTATCTCACATTCAGTTGG
TTAAAAGATTTCAATAATCTTTGCGATTGGTACACTCATCTTCTTGCAAA
ATCACCGACTGGGACAATTCATCTTCACGCTCTTGGCAACACCGTCACAT
CCAATCCTGAAAACGTTGAGTACATTCTCAAAACAAGATTCGATAATTAC
CCAAAAGGGAAGCCCTTCTCAGTAATCTTGGGTGATCTTTTGGGTGGAGG
TATTTTCAACGTTGATGGCAATTCTTGGAAGTTTCAAAGGAAAATAGCAA
GTGTCGAGCTTGGTAGTTTTAACTTTAAAATGTATGCTTTCGAGCTTGTG
ACGGCTGAGATTCGTTTCAGGCTCATTCCTCTCTTATCATCAGCAGCTAA
TAAAGTCAACAATATCTTAGATCTACAAGATGTGTTTCGTCGATTTTCAT
TTGATAGTATTTGCAAATTCTCCTTCGGTTTAGACCCCGAGTGCCTCATG
TTAAATCTGCCAGTTTCAAAATTTGCGACAGCATTTGATCTTGCATCAAA
ACTGTCAG
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