CB290745

Overview
NameCB290745
Unique NameCB290745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB290745_ssr157 microsatellite CB290745_ssr157:157..168. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11819 contig Csv1_Contig11819:102..971. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.992e-74
Identity = 137/217 (63.13%), Postives = 165/217 (76.04%), Query Frame = -2
Query:  198 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNYL 848
            LT+NHIKA+L+NI LGG+DTSAIT+ WAMAEL KNPR+MKK QAEIRN I NK R++  D D+L+YLKMVIKET RLHPP PLL+ RD +  F++NGY I  KT + VN WAIGRD   W+ PE F+PERF D  +D KGQ+FE L FGSGRRICPG+ MG    E  LAN+LY FDWKLP G   +  +++MEEA G  LT+SKK+ L+LVPV YL
Sbjct:  286 LTRNHIKAILMNILLGGIDTSAITMTWAMAELAKNPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVE--DIDMEEAPG--LTVSKKSELVLVPVKYL 498          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 3.008e-70
Identity = 130/217 (59.91%), Postives = 158/217 (72.81%), Query Frame = -2
Query:  198 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNYL 848
            LT+NHIKAVL+N+ LGG+ TSAIT+ WAM EL +NPR+MKK Q+EIRN IG K  +   DIDQL YLKMVI ET RLHPPAPLL+ R+ M  F++NGY I  KT + VN W IGRD   W+ PEEF+PERF++  +D KGQ+FE LPFGSGRR+CP + MG    E  LANLLY FDWKLP G   +  +++MEE+ G  L  SKK  L+LVP  YL
Sbjct:  286 LTRNHIKAVLMNVLLGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVE--DIDMEESPG--LNASKKNELVLVPRKYL 498          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.008e-70
Identity = 135/220 (61.36%), Postives = 165/220 (75.00%), Query Frame = -2
Query:  198 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIG--NKGRVTEAD-IDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNYL 848
            LT+NHIKA+L+NI LGG++TSAIT+ WAMAEL +NPR+MKK Q+EIR  IG  NK R+   D I+ L YL MVIKET RLHP APLL+ R+ +  FK+NGY I PKT + VN WAIGRD + W+ PEEF+PERF+D  +DVKGQD+E LPFGSGRRICP + MG+ T E  LANLLY FDWKLP G   +  ++ M+EA+G  LT  KK  L+LVPV  L
Sbjct:  286 LTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVE--DIYMDEASG--LTSHKKHDLLLVPVKSL 501          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 8.753e-70
Identity = 134/216 (62.04%), Postives = 164/216 (75.93%), Query Frame = -2
Query:  207 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIG--NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPV 848
            LT +H+K ++ NI+L GVDTSAIT+IWAMAEL KNPR+MKKAQ EIR  IG   K R+ E D+D+LQYLK+VIKETLRLHPPAPLL+ R+TM   K+ GYDI  KT++ VNAW+IGR+ + WE+PEEF PERFID P+D KG  FE LPFGSGR+ICPGI  G+ T EL L NLLY FDW+L     E+  +++MEEA     T+ KK PL LVP+
Sbjct:  289 LTIDHLKGIIQNIYLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRL----AEEDKDIDMEEAG--DATIVKKVPLELVPI 498          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.143e-69
Identity = 130/217 (59.91%), Postives = 160/217 (73.73%), Query Frame = -2
Query:  198 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNYL 848
            LT+NHIKA+L+++ L G+DTSAIT+ WAMAEL KNPR+MKK Q+EIR+ I NK R++  D D+L+YLKMVIKET RLHP  PLLI R+ M  F++NGY I  KT + VN WAIGRD   W+ PE F+PERF D  +D KGQ FE LPFG GRR+CP + MG    E  LANLLY FDWKLP G + D  +++MEEA G  LT++KK  LILVP  +L
Sbjct:  286 LTRNHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVD--DIDMEEAPG--LTVNKKNELILVPTKFL 498          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 262.692 bits (670), Expect = 1.950e-69
Identity = 126/217 (58.06%), Postives = 162/217 (74.65%), Query Frame = -2
Query:  198 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNYL 848
            LT+NH+KA+L+N+ LG ++TSA+T+ WAMAEL +NPR+MKK Q+EIRN + NK  +T  DID L YLKMVIKET RLHPP PLL+ R+ M  F++NGY I PKTL+ VN WAIGRD   W+  + F PERF+D  +D KGQ+FE LPFGSGRRICPG+ MG    E  LAN+LY FDW++P+G   +  +++MEE+ G  L + KK  L+LVPV YL
Sbjct:  286 LTRNHVKAILMNVLLGAINTSAMTMTWAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVE--DIDMEESPG--LAVGKKNELLLVPVKYL 498          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.547e-69
Identity = 134/217 (61.75%), Postives = 163/217 (75.12%), Query Frame = -2
Query:  201 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIG-NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNY 848
            LT +H+K +  +IFL G+DTSAIT+IWAMAEL  NPR+MKK Q EIR+ IG  K R+ E D+ +LQYLK+VIKETLRLHP APLL+ R+TM   K+ GYDI  KTL+ V+AW++GRD KYW++PEEF PERFID PVD KG  FE+LPFGSGRR CPG+   + T EL L NLLY FDWKLP    E+  +MNMEE+  V  T+ KK PL L+PV Y
Sbjct:  290 LTIDHLKGITQDIFLAGIDTSAITMIWAMAELVNNPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLP----EEMKDMNMEESGDV--TIVKKVPLELLPVLY 500          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 4.344e-69
Identity = 134/216 (62.04%), Postives = 162/216 (75.00%), Query Frame = -2
Query:  207 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNK--GRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPV 848
            LT +H+K VL NI+  G+DTSAIT+IWAMAEL +NPR+MKKAQ EIR  IG K  GR+ E D+D+LQYLK+V+KETLRLHP APLL+ R+TM   K+ GYDI  K  + VNAW+IGRD + W++PEEF PERFID PVD KG  FE LPFGSGRRICPGI M + T EL L NLLY FDW +P  +++    M+MEEA    LT+ KK PL L+PV
Sbjct:  290 LTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKD----MDMEEAG--DLTVDKKVPLELLPV 499          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.803e-68
Identity = 125/217 (57.60%), Postives = 157/217 (72.35%), Query Frame = -2
Query:  198 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVPVNYL 848
            LT+NHIKA+L+N+ +GG+ TSAIT+ WAM EL +NPR+MKK Q+EIRN IG K  +T  DIDQL YLKMVI ET RLHPP+P LI R  M  F++N Y I  KT + VN WAIGRD   W+ PEEF+PERF++  +D KGQ FE LPFGSGRR+CP + MG    E  LAN+LY FDWK+P G   +  ++++EE+ G  L  SKK  L+LVP+ YL
Sbjct:  286 LTRNHIKAILMNVLIGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAE--DIDLEESPG--LNASKKNELVLVPLKYL 498          
BLAST of CB290745 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.273e-68
Identity = 126/213 (59.15%), Postives = 156/213 (73.24%), Query Frame = -2
Query:  210 LTKNHIKAVLLNIFLGGVDTSAITVIWAMAELCKNPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTMYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINMGLITSELALANLLYCFDWKLPNGREEDGVNMNMEEATGVSLTLSKKTPLILVP 848
            LT+NHIKA+LL++ L G+DTSAIT+ WAM EL +NPR+MKK Q+EIR  +GN+  ++  D+DQL+YLKMVIKET RLHP  PLL+ R+ M  F +NGY I  KT + VN WAIGRD   W+ PE F+PERF+D  +D KGQ FE LPFG GRRICP I MG    E  LANLLY FDWKLP G E    ++++EEA G  LT++KK  L+LVP
Sbjct:  285 LTRNHIKAILLDVLLAGIDTSAITMTWAMTELARNPRVMKKVQSEIRTQMGNRSMISFEDMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVK--DIDVEEAPG--LTVNKKNELLLVP 493          
The following BLAST results are available for this feature:
BLAST of CB290745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C71BQ_ARATH9.992e-7463.13Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BY_ARATH3.008e-7059.91Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH3.008e-7061.36Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71B3_ARATH8.753e-7062.04Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BV_ARATH1.143e-6959.91Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.950e-6958.06Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BP_ARATH2.547e-6961.75Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH4.344e-6962.04Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BX_ARATH4.803e-6857.60Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH6.273e-6859.15Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290745 ID=CB290745; Name=CB290745; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTTTTTTTTTCTAACAAAATATAGATAACGGCCATTAATACAT
AATTTAGGTGATGATAATACATCATCCTCCTTTACGTGATTACAAGTGAT
TACATTACAATCAACCACAACTTGTACAGGAAGTTGAGCAAGTTACAACA
GAGCAATGTTGTTGTTGTCTTTCATTTTTCTGATGGCTATGCTACTGCAG
GTAATTGACTGGCACAAGGATAAGAGGCGTCTTTTTAGAGAGAGTGAGAG
ACACACCAGTTGCCTCCTCCATGTTCATGTTAACACCATCCTCCTCCCTT
CCATTCGGCAATTTCCAATCAAAACAATACAAGAGATTTGCAAGTGCAAG
CTCCGACGTTATTAATCCCATATTAATCCCAGGACAAATTCTTCGGCCGG
ATCCAAATGGTAAATATTCGAAATCTTGTCCTTTAACATCAACCGGCTTA
TCAATAAACCTTTCTGGGATGAATTCTTCAGGACTCTCCCAGTATTTTGA
ATCTCTTCCAATTGCCCAGGCATTCACTTGGATCAACGTTTTGGGATAAA
TGTCATAACCATTAACTTTGAAACGATACATGGTATCTCTCGCAATTAAT
AGTGGGGCAGGAGGGTGCAGTCTCAGAGTTTCCTTGATCACCATCTTCAG
GTACTGAAGTTGATCAATATCGGCTTCAGTAACTCTTCCTTTGTTTCCGA
TATGATTTCTGATTTCAGCTTGTGCTTTTTTCATCAATCTTGGATTCTTA
CAGAGCTCTGCCATTGCCCAAATCACCGTAATTGCGCTGGTGTCTACTCC
TCCCAGAAATATATTCAAAAGTACTGCCTTAATATGATTTTTTGTGAGCC
AAGCTTCACTTTCATGGGAT
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