CB290747

Overview
NameCB290747
Unique NameCB290747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3624 contig Csv1_Contig3624:154..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = -3
Query:  259 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSG----NSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 759
            P + +NVY+F+LFNEN+K G  SERN+GLFYP++ +VY   F   S     NSS T ++  S +                    WC+A++ A E+ L+ A+D+ACG G  DC  IQ    C+ P+TL +HAS+ FNSY+Q+      +C FGGA   V + P Y KC + T
Sbjct:  305 PGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKSNGFHSNSSGTNSSGSSNS--------------------WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYIT 455          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.476e-31
Identity = 72/178 (40.45%), Postives = 99/178 (55.62%), Query Frame = -3
Query:  226 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTGY*VGKKIGSI 759
            P+   +VY++ LFNE+ +  P SE ++GLFY N   VY    +  SG  S T  AN +  Q                  T+C+A      K LQAA+D+ACG G ++C  IQ G +CY PN ++ HAS+AFNSYYQK+ R +GSCDF G A + T  P +G C FP    VG +  ++
Sbjct:  215 PEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVY---LLHVSG--SGTFLANDTTNQ------------------TYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQTV 369          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.888e-30
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = -3
Query:  265 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYD-----------SPFVSTSGNS---SSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 759
            P + ++VYLF+LFNEN+K G  SERN+G+FY N   VY            SP  ST+G S   SS+P  N + T                  + WC+A++ A   +LQ A+D+ACG G  DC  +Q    C++P+T+ +HASYAFN+YYQ+    +  C F GA+  V + P YG C +
Sbjct:  304 PGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNST-------VTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.371e-30
Identity = 65/165 (39.39%), Postives = 92/165 (55.76%), Query Frame = -3
Query:  265 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 759
            P  P+N Y++ L+NE+++ GP SERN+G+ +PN  +VY    +S SG SSS      S                      +CVA A+A + KL   +++ACG+G A+C  IQ G  CY PN +++HAS+AFN YYQK     G+CDF G A   T+ P Y  C +
Sbjct:  306 PDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYP---LSLSGGSSSAALNGSSM---------------------FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.036e-28
Identity = 65/169 (38.46%), Postives = 90/169 (53.25%), Query Frame = -3
Query:  262 PKDP---LNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFP 759
            PK P   +  Y++ L+NE+ + GP SE+N+GLFY N   VY       +G   +    N                      QT+C+A      K LQAA+D+ACG G  DC  + +G +CY+P+ + AH++YAFN+YYQK  + +GSCDF G A V T  P  G C FP
Sbjct:  300 PKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAG-AGAILANDTTN----------------------QTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFP 445          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.308e-28
Identity = 65/165 (39.39%), Postives = 85/165 (51.52%), Query Frame = -3
Query:  265 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 759
            P      YLF+LF+ENQK GP +ER++GLF P+   VYD   +    + + TP+ N S                      WCVA   A    LQ  I+YACG    DC+PIQ G  C+ PN+L+AHASY  N+YYQ       +CDF G   V +  P YG C++
Sbjct:  305 PNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGK--------WCVAKDGANGTDLQNNINYACGF--VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.015e-28
Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = -3
Query:  256 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTG 759
            P  P++ Y+FAL++EN K GP+SER +GLF  +   VYD     +S +SS TP+   + +                    WCV    A  ++LQA++D+ACG G  DC  IQ G  C++PN + +HA+YA N Y+QK  ++   CDF   A V +Q P Y  C +P G
Sbjct:  304 PGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSS-SSSQTPSGKVTSSG-------------------WCVPKKGATNEELQASLDWACGHG-IDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGG 450          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.120e-25
Identity = 64/168 (38.10%), Postives = 91/168 (54.17%), Query Frame = -3
Query:  265 PKDP---LNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 759
            PK P   ++ Y++ L+NE+ K G  SE+N+GLF  N + VY    V    NS S  A + +                    QT+C A   A  K LQAA+D+ACG G  DC PI++G TCY+P+ + AHA+YAF++YY +      +C+F G A + T  P +G C F
Sbjct:  309 PKRPGIAVSTYIYELYNEDTKAG-LSEKNWGLFNANGEPVY----VLRLTNSGSVLANDTTN-------------------QTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF 452          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.022e-20
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = -3
Query:  259 PKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 759
            P  P+  ++F+LFNENQK G  ++R++G+ +P+   +YD  F   +  +   P    +                   GQ WCV    A E +L+  +  AC +    C  +  G  CY+P ++  HASYA NSY+ +   ++  C F G A+  T  P   +C+FP+
Sbjct:  322 PGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNN-------------VPYKGQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475          
BLAST of CB290747 vs. ExPASy Swiss-Prot
Match: E13L1_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.720e-19
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -3
Query:  259 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 525
            + WCVA  NA +  LQ AI++ACG+GGADC PIQ+G  C DP  ++  AS+ FN+YY K   +  +C+F   A + +  P  G C++P+
Sbjct:   39 ELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPS 127          
The following BLAST results are available for this feature:
BLAST of CB290747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
E1313_ARATH2.635e-3240.35Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E131_ARATH8.476e-3140.45Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E1312_ARATH1.888e-3039.11Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E134_ARATH9.371e-3039.39Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E133_ARATH1.036e-2838.46Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13B_WHEAT2.308e-2839.39Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E137_ARATH3.015e-2838.10Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E132_ARATH3.120e-2538.10Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
EA6_ARATH3.022e-2029.94Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E13L1_ARATH9.720e-1943.82Glucan endo-1,3-beta-glucosidase-like protein 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290747 ID=CB290747; Name=CB290747; organism=Citrus sinensis; type=EST; length=761bp
TTTTTTTTTTTTTTTTTATCCCATAAAATAATGGACTACTTTTATGATCA
TTAGAATAAATACAATAAGGATTTGATCCTCTTGACACTAGAGTCAAACC
AACTGATAACAACCCCACCCACTCAGCGTAAAATTTAAATACAAGGGAGA
AAAATTAATGTTCCAATCCTCTAAATCTATCAAAAAAAATCATCACCAAT
CGTAAGCCGCGACCACAAATCAGCTAATGCTCCCTATTTTTTTTCCCACT
CAATAGCCAGTTGGGAACTGGCATTTTCCATATTTAGGAGCCTGCGTGAC
CACGTAGGCCGCACCACCAAAATCACAAGATCCAGCCTTACGCACTTGCT
TCTGATAATAACTATTGAAGGCATACGATGCATGGGCTTCTAACGTGTTA
GGATCGTAACACGTGGCGCCCTCTTGAATCGGTCGGCAATCAGCGCCTCC
CTCGCCACAGGCATAATCAATTGCGGCTTGCAGCTTTTTCTCACCAGCAT
TCGCGTTAGCCACGCACCAAGTCTGTCCCGCCGCCGAGGGCGACACGTCA
CCACCTCCTCCTCCGCTCACCGGAACTTGAGTCTTGCTCTTATTGGCTGC
CGGCGTTGAGCTTGAGTTCCCACTAGTTGACACAAACGGCGAGTCGTACA
CCGTCTGTTCGTTGGGATAAAACAACCCGTAATTCCTTTCCGATGTGGGA
CCCTGTTTTTGATTCTCATTGAACAAAGCGAAGAGGTAAACGTTAAGTGG
GTCCTTTGGTC
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