CB290786

Overview
NameCB290786
Unique NameCB290786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1133..1896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.947e-71
Identity = 129/133 (96.99%), Postives = 129/133 (96.99%), Query Frame = -3
Query:  364 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 762
            FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFES CGALSQYGMK MR LANICN GIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  362 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.562e-53
Identity = 95/133 (71.43%), Postives = 112/133 (84.21%), Query Frame = -3
Query:  364 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 762
            FWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+ CG+LSQYGMK MR  AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  352 FWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.954e-51
Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = -3
Query:  364 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 762
            FW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE  CG+LSQYG+K MR  ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  362 FWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.354e-51
Identity = 93/133 (69.92%), Postives = 112/133 (84.21%), Query Frame = -3
Query:  364 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 762
            FW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+ CG+LSQYGMK MR  ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  361 FWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.004e-47
Identity = 91/133 (68.42%), Postives = 107/133 (80.45%), Query Frame = -3
Query:  364 FWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 762
            FW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE  CG+LSQYG+K MR +AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  347 FWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.838e-33
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = -3
Query:  364 WDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 759
            W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMK MR  ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  366 WQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30
Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = -3
Query:  364 WDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 759
            W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+ CG L+QYGMK MR  ANICN G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  364 WQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.780e-28
Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = -3
Query:  364 WDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 759
            W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+ CG+L+QYGMK MR  ANICN G+ +  M +A   AC    +G     + G+SA
Sbjct:  362 WQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = -3
Query:  364 WDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 759
            W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+ CG+L+QYGMK MR   N+CN G+ K  M EA   AC    +G     + G+SA
Sbjct:  344 WQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB290786 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.507e-27
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = -3
Query:  415 WDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESPCGALSQYGMKPMRFLANICNPGIGKEKMAEASAQAC 759
            W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE  CG+L+QYGMK MR  AN+CN G+ KE M EAS  AC
Sbjct:  355 WHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CB290786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI4.947e-7196.99Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU3.562e-5371.43Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH1.954e-5168.42Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA4.354e-5169.92Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH1.004e-4768.42Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.838e-3350.00Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN1.902e-3046.97Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.780e-2845.45Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN5.179e-2844.70Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH1.507e-2751.30Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01de10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01de10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290786 ID=CB290786; Name=CB290786; organism=Citrus sinensis; type=EST; length=764bp
TTTTTTTTTTTTTTTTTAATCCAAAATTAGAGCCCTTTTTTCAATATTTA
GAGCAACACCACGAAGAGGGTTGACCTTCACGGTCTACAAATCAGGAACA
AATATAGCTACATAAGCATAAAATAGCATCGCATACATCCAAAATATATA
CTATCAAATTACAACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATA
ATTACAAGGAAGCAATCACCAGCCAAATGAAAATAGACATTGCCATAAAT
GGAAGCAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTA
TAATGAAAACTAACATATTTCAAGAACTGGCTTATGATATTCGCACAGTT
CTCGGCTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCA
GAAGGAATATTTTCACAGGCTTGGGCTGATGCTTCCGCCATCTTCTCTTT
CCCAATTCCTGGATTACAGATGTTTGCAAGAAAACGCATGGGCTTCATTC
CATATTGCGATAGAGCTCCACAGGGCGACTCAAAAGTCCTCACCAGTGAT
TTGAGGCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGT
GTTCAAGATCTCTGGACCTTTCTCAATTCCAAATAAAAGCTTTCCAATAA
GTTTGATGCTGTGGTCTACATGCATTCTATGAGACATTGCTTCAAAAAAC
TGCTTCTGAGCTTCAGCCTTCCTAGGAGTGCCCTCAGGGGCCTTGCGGTA
CTTGTCCCAAAAAT
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