CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig153 contig Csv1_Contig153:377..1187. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.706e-72
Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  318 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQN 815
            KK++ K QQ P+FMAEPMRASNSFVGTEEYIAPEII+GAGHTSAVDWWALGIL+YEMLYGYTPFRGKTRQKTF N+L KDLKFP+S P SL  KQL++RLL RDPK RLG  EGANE+K+H FFKG+NWAL+RC NPPEL+ P+F+ + E   KVVDP ++DLQ N
Sbjct:  829 KKKQQKSQQTPIFMAEPMRASNSFVGTEEYIAPEIISGAGHTSAVDWWALGILMYEMLYGYTPFRGKTRQKTFTNVLQKDLKFPASIPASLQVKQLIFRLLQRDPKKRLGCFEGANEVKQHSFFKGINWALIRCTNPPELETPIFSGEAENGEKVVDPELEDLQTN 994          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.402e-58
Identity = 112/163 (68.71%), Postives = 127/163 (77.91%), Query Frame = -3
Query:  336 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTE---KEYKVVDPGM 815
            K+RR K Q  P F+AEP   SNSFVGTEEYIAPEII GAGHTSA+DWWALGILLYEMLYG TPFRGK RQKTFANILHKDL FPSS P SL  +QL+  LL+RDP SRLGS  GANEIK+H FF+G+NW L+R M+PP LDAPL   + +   K+ K  D G+
Sbjct:  741 KRRRSKSQPLPTFVAEPSTQSNSFVGTEEYIAPEIITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLVGRQLINTLLNRDPSSRLGSKGGANEIKQHAFFRGINWPLIRGMSPPPLDAPLSIIEKDPNAKDIKWEDDGV 903          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: G11A_ORYSJ (Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.040e-37
Identity = 73/135 (54.07%), Postives = 94/135 (69.63%), Query Frame = -3
Query:  384 PVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 785
            P  +AEP  A S SFVGT EY+APEII G GH SAVDWW  GI LYE+L+G TPF+G   + T  N++ + L+FP     S  A+ L+  LL ++P+ RLG   GA EIK+HPFF+GVNWAL+RC +PPE+  P+
Sbjct:  419 PELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPEVPRPV 553          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: G11A_ORYSI (Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.040e-37
Identity = 73/135 (54.07%), Postives = 94/135 (69.63%), Query Frame = -3
Query:  384 PVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 785
            P  +AEP  A S SFVGT EY+APEII G GH SAVDWW  GI LYE+L+G TPF+G   + T  N++ + L+FP     S  A+ L+  LL ++P+ RLG   GA EIK+HPFF+GVNWAL+RC +PPE+  P+
Sbjct:  419 PELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPEVPRPV 553          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: NRC2_NEUCR (Serine/threonine-protein kinase nrc-2 OS=Neurospora crassa GN=nrc-2 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.155e-36
Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 755
            +NSFVGTEEYIAPE+I G+GHTSAVDWW LGIL+YEMLYG TPF+GK R  TFANIL +D+ FP    +   S   K L+ +LL +D   RLG+  GA++IK HPFF+   WAL+R M PP
Sbjct:  426 TNSFVGTEEYIAPEVIKGSGHTSAVDWWTLGILIYEMLYGTTPFKGKNRNATFANILREDIPFPDHAGAPQISNLCKSLIRKLLIKDENRRLGARAGASDIKTHPFFRTTQWALIRHMKPP 546          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPK1_PHAVU (Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.509e-36
Identity = 76/151 (50.33%), Postives = 97/151 (64.24%), Query Frame = -3
Query:  339 PVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF-ATDTEKEYKVVDPG 785
            P  +AEP  A S SFVGT EY+APEII G GH SAVDWW  GI LYE+L+G TPF+G   + T  N++ + L+FP S   S  A+ L+  LL ++P+ RL    GA EIK+HPFF+ VNWAL+RC  PPE+   +     TEK+  V   G
Sbjct:  451 PELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCATPPEVPRQVINLPQTEKDLGVKPSG 601          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PPK14_SCHPO (Serine/threonine-protein kinase ppk14 OS=Schizosaccharomyces pombe GN=ppk14 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.971e-36
Identity = 74/121 (61.16%), Postives = 86/121 (71.07%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 755
            +NSFVGTEEYIAPE+I G GHTSAVDWW LGIL YEMLY  TPF+GK R  TF+NILHKD+ FP    +   S   K L+ +LL +D   RLGS  GA ++K HPFFK V WAL+R   PP
Sbjct:  379 TNSFVGTEEYIAPEVIKGCGHTSAVDWWTLGILFYEMLYATTPFKGKNRNMTFSNILHKDVIFPEYADAPSISSLCKNLIRKLLVKDENDRLGSQAGAADVKLHPFFKNVQWALLRHTEPP 499          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KIN82_YEAST (Probable serine/threonine-protein kinase KIN82 OS=Saccharomyces cerevisiae GN=KIN82 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.971e-36
Identity = 69/122 (56.56%), Postives = 91/122 (74.59%), Query Frame = -3
Query:  390 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 755
            +NSFVGTEEY+APE+I G GHT+AVDWW LGIL+YEML+G TPF+G    +TF+NIL KD+KFP     S + K L+ +LL+++   RLGS  GA +IK+HPFFK V W+ +R  +PP + A
Sbjct:  499 TNSFVGTEEYLAPEVIRGNGHTAAVDWWTLGILIYEMLFGCTPFKGDNSNETFSNILTKDVKFPHDKEVSKNCKDLIKKLLNKNEAKRLGSKSGAADIKRHPFFKKVQWSFLRNQDPPLIPA 620          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPK7_ARATH (Putative serine/threonine-protein kinase PK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.733e-36
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = -3
Query:  372 PVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 785
            P  +AEP  A S SFVGT EY+APEII G GH SAVDWW  GI LYE+L+G TPFRG   + T  N++ + L+FP     S  A+ L+  LL ++P+ RL    GA EIK+HPFF+ VNWAL+RC +PP++  P+   D
Sbjct:  402 PELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGITPFRGGDNRATLFNVVGQPLRFPEHPNVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCTSPPQIPQPVKPMD 540          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KN8R_YEAST (Probable serine/threonine-protein kinase YNR047W OS=Saccharomyces cerevisiae GN=YNR047W PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35
Identity = 66/118 (55.93%), Postives = 86/118 (72.88%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 755
            +NSFVGTEEYIAPE+I G GHT+AVDWW LGIL+YEML+G+TPF+G    +TF NIL  ++ FP++   S   K L+ +LL ++   RLG   GA ++KKHPFFK V W+L+R   PP
Sbjct:  674 TNSFVGTEEYIAPEVIRGNGHTAAVDWWTLGILIYEMLFGFTPFKGDNTNETFTNILKNEVSFPNNNEISRTCKDLIKKLLTKNESKRLGCKMGAADVKKHPFFKKVQWSLLRNQEPP 791          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
PHOT1_ARATH1.706e-7274.70Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=... [more]
PHOT2_ARATH1.402e-5868.71Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=... [more]
G11A_ORYSJ3.040e-3754.07Protein kinase G11A OS=Oryza sativa subsp. japonic... [more]
G11A_ORYSI3.040e-3754.07Protein kinase G11A OS=Oryza sativa subsp. indica ... [more]
NRC2_NEUCR1.155e-3660.33Serine/threonine-protein kinase nrc-2 OS=Neurospor... [more]
KPK1_PHAVU1.509e-3650.33Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 S... [more]
PPK14_SCHPO1.971e-3661.16Serine/threonine-protein kinase ppk14 OS=Schizosac... [more]
KIN82_YEAST1.971e-3656.56Probable serine/threonine-protein kinase KIN82 OS=... [more]
KPK7_ARATH5.733e-3651.80Putative serine/threonine-protein kinase PK7 OS=Ar... [more]
KN8R_YEAST6.339e-3555.93Probable serine/threonine-protein kinase YNR047W O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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