CB290900

Overview
NameCB290900
Unique NameCB290900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.413e-76
Identity = 145/168 (86.31%), Postives = 147/168 (87.50%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPS           DQ VKVVDIVDTFRLQEQPAFDKK FVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLL KLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.617e-74
Identity = 137/168 (81.55%), Postives = 147/168 (87.50%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPS           DQ VKVVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLL KLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.129e-72
Identity = 133/168 (79.17%), Postives = 144/168 (85.71%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPS           DQ VKVVDIVDTFRLQEQP  DKK F+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.992e-70
Identity = 131/168 (77.98%), Postives = 142/168 (84.52%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPS           DQ V+VVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYYKEG+ DP FLY+A  LKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.602e-70
Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPY+EIENGILWEV+GKWVVQGA+DVDIGANPS           DQ VKVVDIVDTFRLQEQP FDKK FVT+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GATDPTFLY +  LKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.571e-70
Identity = 133/168 (79.17%), Postives = 142/168 (84.52%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPS           D  VKVVDIVDTFRLQEQPAFDKK FVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LL K+ D QFFVGESM DD CLVFAYYK+GA DPTFLY A ALKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 2.203e-69
Identity = 130/168 (77.38%), Postives = 140/168 (83.33%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPS           DQ VKVVDIVDTFRLQEQPAFDKK FVTY+KR+IK LTPKL  E QE FKKNIE ATKFLL KL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A  LKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.086e-68
Identity = 132/170 (77.65%), Postives = 141/170 (82.94%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXD--QPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLL+GDELLSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPS              Q VKVVDIVDTFRLQEQP FDKK FVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLL KLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct:    1 MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 9.255e-68
Identity = 128/168 (76.19%), Postives = 138/168 (82.14%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS           D   KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.835e-67
Identity = 127/168 (75.60%), Postives = 140/168 (83.33%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            M+VYQDLL+GDELLSDSFPYKE+ NG+LWEVEGKWVVQGAVDVDIGANPS            + VKVVDIVDTFRLQEQP FDKK F+ ++KR+IK L  KLSEERQ  FKKN+EGA K L+ KLSDLQFFVGESMHDDG +VFAYYK+GATDPTFLY AD LKEVKC
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKI-RLVKVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167          
The following BLAST results are available for this feature:
BLAST of CB290900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_HEVBR5.413e-7686.31Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV6.617e-7481.55Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA2.129e-7279.17Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC1.992e-7077.98Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ2.602e-7079.17Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN7.571e-7079.17Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU2.203e-6977.38Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN7.086e-6877.65Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH9.255e-6876.19Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ7.835e-6775.60Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290900 ID=CB290900; Name=CB290900; organism=Citrus sinensis; type=EST; length=794bp
TTTTTTTTTTTTTTTTTAACAAAAACTATTAAGTTATTTGGGCCCTTTAT
CTCAAACCATAAAACCCAATAATTAAGAGCAGAACCACTTATTGTTTATG
TCAAAATAAAAACTAAAAAACAGCAAGCACAAGTCCCGAGTAAACCAGCA
CAAAAGATACATAAAAATAACCGCGGGCAATAATTAAAATTAGAACTACG
GCAGGCACTTCCTCTTCGAAGCCCAGCTTAGCACTTCACCTCCTTCAATG
CATCAGCCATATACAAAAATGTTGGGTCGGTCGCACCTTCCTTGTAGTAA
GCAAAGACAAGACAGCCATCATCATGCATGCTCTCCCCAACAAAGAATTG
AAGGTCACTGAGCTTCAAAAGCAAGAACTTGGTCGCTCCCTCAATATTCT
TCTTAAATATCTCCTGCCTCTCCTCACTCAGCTTGGGCGTCAGCAACTTG
ATGAATCTCTTCATGTATGTTACAAACGGCTTCTTGTCAAAAGCGGGTTG
CTCCTGTAGCCTGAATGTGTCGACAATGTCAACCACCTTCACGGGTTGGT
CATCAACACCCTCATCCTCATCAGCTCCTTCGGCAGAAGGATTTGCACCA
ATGTCAACATCAACGGCTCCTTGTACAACCCACTTTCCCTCAACTTCCCA
CAGAATCCCATTCTCAATTTCCTTGTAGGGAAAAGAATCGGAGAGAAGCT
CATCACCGGTGAGGAGATCTTGATAGACCAACATGATTGCAGTCTCTCTC
GCGAACACAAAAAAGAAAAATAATCAACGGAGAAAACTGGAGAG
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