CB290902

Overview
NameCB290902
Unique NameCB290902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 4.393e-113
Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 3
Query:    3 TLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            TLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVE FFAV+LGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPT+ YIYADELIDVL+KK ASGNY
Sbjct:   11 TLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNY 210          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 6.402e-80
Identity = 143/199 (71.86%), Postives = 166/199 (83.42%), Query Frame = 3
Query:    6 LLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            LLV+L  ++  +R    D++KLPS+A RFF         NDDD + GTRWAVL+AGS+G+WNYRHQADICHAYQLLRKGGLK+ENI+VFMYDDIA N ENPRPG IIN PHG DVY+GVPKDYTG+DV V+N FAVILG+KTA+ GGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPT+ Y+YA++L DVL+KK A G Y
Sbjct:   17 LLVSLVAVS-AARSGPDDVIKLPSQASRFFRPAE-----NDDDSNSGTRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSPYLYANDLNDVLKKKHALGTY 209          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.426e-79
Identity = 137/200 (68.50%), Postives = 161/200 (80.50%), Query Frame = 3
Query:    3 TLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            T++V    +    RD+ GD L+LPSE  RFF       +  +DDD  GTRWA+LLAGSNG+WNYRHQ+D+CHAYQLLRKGG K+ENIIVFMYDDIA NEENPRPGVIIN P GDDVY GVPKDYTG +V  +NF+A +LGNK+ALTGGSGKVVDSGPNDHIF++Y+DHGGPGVLGMP   Y+YA +L +VL+KK ASG Y
Sbjct:   13 TIVVTFLTVVSSGRDLPGDYLRLPSETSRFFR------EPKNDDDFEGTRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDLNEVLKKKHASGTY 206          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.130e-76
Identity = 138/199 (69.35%), Postives = 158/199 (79.40%), Query Frame = 3
Query:    6 LLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            LL+ L  +    RD+ GD L+LPS++       G G  V+      GTRWA+L AGS+G+WNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFN ENPR GVIIN P+GD+VYKGVPKDYTGEDVT  NF+A +LG+K+ LTGGSGKVV+SGPNDHIFIFYSDHGGPGVLG P   YIYA +L +VL+KK ASG Y
Sbjct:   14 LLLFLVALVSAGRDLVGDFLRLPSDS-------GNGDNVH------GTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPGVLGSPAGPYIYASDLNEVLKKKHASGTY 199          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.249e-75
Identity = 133/185 (71.89%), Postives = 159/185 (85.95%), Query Frame = 3
Query:   48 IAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            ++GD++KLPS A +FF          +DDDS  T+WAVL+AGS+G+WNYRHQAD+CHAYQLL+KGG+K+ENI+VFMYDDIA NEENPRPGVIIN P+G+DVY GVPKDYTG++V V+N  AVILGNKTAL GGSGKVVDSGPNDHIFI+YSDHGGPGVLGMPT+  +YA++L DVL+KK ASG Y
Sbjct:   18 VSGDVIKLPSLASKFFR------PTENDDDS--TKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPNLYANDLNDVLKKKYASGTY 194          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.981e-69
Identity = 121/159 (76.10%), Postives = 139/159 (87.42%), Query Frame = 3
Query:  126 DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            DDDD +GTRWAVL+AGS GF NYRHQAD+CHAYQLLRKGGLK+ENIIVFMYDDIA NE NPRPGVIINHP G+DVY GVPKDYTGE VT +N +AV+LG+K+A+ GGSGKVVDS PND IF++YSDHGGPGVLGMP   Y+YA + I+VL+KK A+G Y
Sbjct:   54 DDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLYYSDHGGPGVLGMPNLPYLYAMDFIEVLKKKHAAGGY 212          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 7.342e-68
Identity = 118/157 (75.16%), Postives = 135/157 (85.99%), Query Frame = 3
Query:  132 DDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            DD VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA+N  NPRPGVIINHP G DVY GVPKDYTGEDVT EN +AVILG+K+ + GGSGKV++S P D IFIFYSDHGGPGVLGMP   ++YA + IDVL+KK ASG Y
Sbjct:   34 DDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPEDRIFIFYSDHGGPGVLGMPNAPFVYAMDFIDVLKKKHASGGY 190          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.252e-67
Identity = 122/181 (67.40%), Postives = 145/181 (80.11%), Query Frame = 3
Query:   60 ILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            ++KLP+E             V+ D D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGGLK+ENI+VFMYDDIA NE NPR GVIINHP G+D+Y GVPKDYTG++VT EN FAVILG+K+ L GGSGKV++S P D IFI+YSDHGGPG+LGMP   Y+YA + IDVL+KK ASG+Y
Sbjct:   42 VIKLPTEP------------VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIYYSDHGGPGILGMPNMPYLYAMDFIDVLKKKHASGSY 210          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.975e-66
Identity = 118/181 (65.19%), Postives = 144/181 (79.56%), Query Frame = 3
Query:   60 ILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            ++KLP++            +V+ + D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA +E NPRPGVIIN+P G DVY GVPKDYTGE VT  NFFAV+LG+K+ + GGSGKV++S P D IF++YSDHGGPGVLGMP   Y+YA + IDVL+KK ASG Y
Sbjct:   40 VIKLPTQ------------EVDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVYYSDHGGPGVLGMPNMPYLYAMDFIDVLKKKHASGGY 208          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 246.514 bits (628), Expect = 7.597e-65
Identity = 110/160 (68.75%), Postives = 134/160 (83.75%), Query Frame = 3
Query:  123 NDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQKKPASGNY 602
            + D+D VGTRWAVL+AGS+G+ NYRHQAD+CHAYQ+LRKGGLK+ENI+V MYDDIA +  NPRPG +INHP GDDVY GVPKDYTG  VT  NF+AV+LG++ A+ GGSGKV+ S PNDHIF++Y+DHGGPGVLGMP   +IYA + I+ L+KK ASG Y
Sbjct:   42 DQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGPGVLGMPNTPHIYAADFIETLKKKHASGTY 201          
The following BLAST results are available for this feature:
BLAST of CB290902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
VPE_CITSI4.393e-11397.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH6.402e-8071.86Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA1.426e-7968.50Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU1.130e-7669.35Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH1.249e-7571.89Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO2.981e-6976.10Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
LEGU_CANEN7.342e-6875.16Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_SOYBN1.252e-6767.40Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU8.975e-6665.19Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH7.597e-6568.75Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290902 ID=CB290902; Name=CB290902; organism=Citrus sinensis; type=EST; length=604bp
GCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCAGAGACATA
GCAGGTGACATTCTGAAGCTACCATCGGAAGCCTATAGGTTCTTCCATAA
TGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGTCGGCACGA
GATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATTACAGGCAT
CAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGTGGGCTGAA
GGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTTTCAATGAAG
AGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCGATGATGTT
TACAAAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACTGTTGAAAA
CTTTTTTGCTGTTATCCTGGGAAATAAAACAGCTCTTACAGGGGGCAGTG
GGAAGGTTGTGGATAGCGGCCCCAATGATCATATTTTCATATTCTACTCA
GATCATGGTGGCCCTGGGGTGCTAGGGATGCCCACCAATCTATACATATA
TGCTGATGAACTGATCGATGTCTTACAAAAGAAGCCTGCTTCTGGGAACT
ACAA
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