CB290907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_ARATH (Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.721e-69 Identity = 128/207 (61.84%), Postives = 163/207 (78.74%), Query Frame = -1 Query: 182 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 802 TGSTA VD+IG+LL+ G+L +IVGIPTSK+T+EQA SL IPL+ LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E ASK FVV+ D+SK+V +GGSKLA+PVE+V FCWK+ +L+ L GCEA LR GE GK ++TDN NYI+D++ E + D + I +L GVVEHG+FLDMA+ VIIAG+ GV++K+K Sbjct: 58 TGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.386e-47 Identity = 104/204 (50.98%), Postives = 139/204 (68.14%), Query Frame = -1 Query: 194 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVD-PELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 802 TGSTAAF V + Q ++ L+ +G+PTS+RT EQA+SL IPL TL++ P LDLAIDGADE++ LNL+KG GGALLREK+VEA++ +++AD SK V+ L G++ +PVEVV+F WK L R++ LGC+A LR G PY+TD +YI+D F PI + ++ GVVEHGLF+ MAT IIAG G+E Sbjct: 29 TGSTAAFAVGALAQRMQKEGLQ-FIGVPTSERTAEQARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIADASKKVAHL-GTRFPVPVEVVRFGWKTTLARVE----ALGCQAVLRRTAEGDPYLTDEQHYILDCQF-GPIANPAKLAEQLKGTVGVVEHGLFIGMATEAIIAGPEGIE 225
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.574e-44 Identity = 98/202 (48.51%), Postives = 131/202 (64.85%), Query Frame = -1 Query: 197 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 802 +GSTA F + I +L+K G+L+DIVGIP+S TEE A+SL IPL ++H +D+ IDGADEVDP+LNL+KG GGALLREK+V A+K +++ DESK+ L G+ A+PVEVV F L+ LG + +RE + GK + TDN N I+D F P+ D V G + + GVVEHGLFL VI+AG G+ Sbjct: 29 SGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTEEVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIVDESKISDKL-GTIFALPVEVVPFATASETRFLE----SLGAKVTVRENQLGKAFKTDNHNRILDADF-GPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_BACCR (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpiA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.898e-42 Identity = 93/203 (45.81%), Postives = 130/203 (64.04%), Query Frame = -1 Query: 194 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 802 TGST + + K+G+ +K G +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L L+KG GGALLREK+V ++SK +++ADESKLV+ LG +P+E++ F WK + ++ + LGC+ LR +N + YITDN N IID F I + V T++ + GVVE GLF+ M + II K G++ Sbjct: 25 TGSTVYWTIQKLGERVKEG--LSFQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESKLVTHLG--TFPLPIEIIPFSWK----QTENKIQSLGCQTTLRL-KNNETYITDNNNMIIDCIFPNHISNPVHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIK 218
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_ROSCS (Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpiA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.589e-41 Identity = 98/202 (48.51%), Postives = 129/202 (63.86%), Query Frame = -1 Query: 197 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 802 TGSTA+F++ + L G L+ +VG+PTS++T A+ L IPLTTLD HPSLDLA+DGADE+DP L L+KG GGA+LREK+V A++ FVV+A SK V L G + +PVEVV F + RL LG E LR +G P++TD N I+D +F I D + I + GVV HGLFL MA+ +IAG G+ Sbjct: 28 TGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERL-GERSPLPVEVVTFGMPLCIRRL----AALGGEPVLRCDHSGAPFVTDEGNLILDCHFGV-IADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGI 223
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_BACWK (Ribose-5-phosphate isomerase A OS=Bacillus weihenstephanensis (strain KBAB4) GN=rpiA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.678e-40 Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = -1 Query: 194 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 802 TGST + + K+G ++ G I +PTSK TE AK L+IPL +L++ LDL IDGADE++ +L L+KG GGALLREK+V +SK +++ADESKLVS LG +P+E++ F WK R+Q LGCE LR ++ +P+ITDN N IID F I + TE+ + GVVE GLF++M + II K G++ Sbjct: 26 TGSTVYWTIQKLGHRVQEG--LSIQAVPTSKETEVLAKQLSIPLISLNEIDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSKELIIIADESKLVSHLG--TFPLPIEIISFSWKQTEKRIQ----SLGCETHLRM-KDSRPFITDNGNLIIDCIFPNKILNPNDTHTELKMITGVVETGLFINMKSKAIIGTKNGIK 219
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_CHLSY (Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40 Identity = 90/202 (44.55%), Postives = 130/202 (64.36%), Query Frame = -1 Query: 194 GSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 799 GSTAA+ I + L G+L DIVG+P ++ T + A+ L IPLTTLD+ ++DL IDGADEVDP+L+L+KG GGALLREKMV AS+ ++ D+SKL L G++ A+P+EVV F W+ L+ G +LR +G+P+ TD N I+D + P+ D + ++ G+VEHGLF+ +AT + +AG GV+ Sbjct: 32 GSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDEVAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPAL-GTRFALPLEVVDFGWRATARWLE----AQGGTVQLRLRADGQPFRTDQGNLILD-WKCGPLNDPAALAAQLSARAGIVEHGLFIGLATDLFVAGPDGVQ 227
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_CHLAA (Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40 Identity = 90/202 (44.55%), Postives = 130/202 (64.36%), Query Frame = -1 Query: 194 GSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 799 GSTAA+ I + L G+L DIVG+P ++ T + A+ L IPLTTLD+ ++DL IDGADEVDP+L+L+KG GGALLREKMV AS+ ++ D+SKL L G++ A+P+EVV F W+ L+ G +LR +G+P+ TD N I+D + P+ D + ++ G+VEHGLF+ +AT + +AG GV+ Sbjct: 32 GSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDEVAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPAL-GTRFALPLEVVDFGWRATARWLE----AQGGTVQLRLRADGQPFRTDQGNLILD-WKCGPLNDPAALAAQLSARAGIVEHGLFIGLATDLFVAGPDGVQ 227
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_BACC1 (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 10987) GN=rpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40 Identity = 92/203 (45.32%), Postives = 130/203 (64.04%), Query Frame = -1 Query: 194 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 802 TGST + ++K+G+ +K G +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L+L+KG GGALLREK+V ++SK +++ADESKLV+ LG +PVE++ F WK ++Q LGC+ LR +N + +ITDN N IID F I + + + + GVVE GLF++M + II K G++ Sbjct: 25 TGSTVYWTIEKLGERVKEG--LSFQAVPTSKETEVLAQQLNIPLISLNDIQSLDLTIDGADEIDSNLHLIKGGGGALLREKIVASSSKELLIIADESKLVTHLG--TFPLPVEIIPFSWKQTESKIQ----SLGCQTTLRL-KNNETFITDNNNMIIDCVFPHNITNPANLHNHLKMITGVVETGLFVNMTSKAIIGTKNGIQ 218
BLAST of CB290907 vs. ExPASy Swiss-Prot
Match: RPIA_BACAN (Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40 Identity = 92/203 (45.32%), Postives = 127/203 (62.56%), Query Frame = -1 Query: 194 TGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 802 TGSTA + + K+GQ +K G I +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK ++Q LGC+ LR +N + +ITDN N IID F I + + GVVE GLF++M + II K G++ Sbjct: 25 TGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQ----SLGCQTTLRL-KNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQ 218 The following BLAST results are available for this feature:
BLAST of CB290907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290907 ID=CB290907; Name=CB290907; organism=Citrus sinensis; type=EST; length=802bpback to top |