CB290908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_ARATH (Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.168e-67 Identity = 121/189 (64.02%), Postives = 157/189 (83.07%), Query Frame = 2 Query: 203 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIIDLYIK 769 LTQD+LK++AA KAV++V+SGM LGLGTGST VD+IG+LL+ G+L +IVGIPTSK+T+EQA SL IPL+ LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E ASK FVV+ D+SK+V +GGSKLA+PVE+V FCWK+ +L+ L + GCEA L+ GE GK ++TDN NYI+D++++ Sbjct: 31 LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNGNYIVDMHVE 219
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.043e-44 Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 2 Query: 212 DDLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVD-PELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIID 757 D+LK+ AA A V+SGM +GLGTGST AF V + Q ++ L+ +G+PTS+RT EQA+SL IPL TL++ P LDLAIDGADE++ LNL+KG GGALLREK+VEA++ +++AD SK V+ L G++ +PVEVV+F WK L R++ LGC+A L+ G PY+TD +YI+D Sbjct: 5 DELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGLQ-FIGVPTSERTAEQARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIADASKKVAHL-GTRFPVPVEVVRFGWKTTLARVE----ALGCQAVLRRTAEGDPYLTDEQHYILD 181
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.043e-44 Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 2 Query: 206 TQDDLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIID 757 +QD LKK AA+KAV+Y++SGM +GLG+GST F + I +L+K G+L+DIVGIP+S TEE A+SL IPL ++H +D+ IDGADEVDP+LNL+KG GGALLREK+V A+K +++ DESK+ L G+ A+PVEVV F L+ LG + ++E + GK + TDN N I+D Sbjct: 3 SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTEEVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIVDESKISDKL-GTIFALPVEVVPFATASETRFLE----SLGAKVTVRENQLGKAFKTDNHNRILD 181
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_ROSCS (Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpiA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.464e-41 Identity = 91/181 (50.28%), Postives = 125/181 (69.06%), Query Frame = 2 Query: 221 KKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIIDLY 763 ++ AA++A+DYV+SGMA+GLGTGST +F++ + L G L+ +VG+PTS++T A+ L IPLTTLD HPSLDLA+DGADE+DP L L+KG GGA+LREK+V A++ FVV+A SK V L G + +PVEVV F + RL LG E L+ +G P++TD N I+D + Sbjct: 7 RRRAAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERL-GERSPLPVEVVTFGMPLCIRRL----AALGGEPVLRCDHSGAPFVTDEGNLILDCH 182
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BACAN (Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.712e-40 Identity = 88/181 (48.62%), Postives = 122/181 (67.40%), Query Frame = 2 Query: 215 DLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIID 757 DLK++A + A +VK GM +GLGTGST + + K+GQ +K G I +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK ++Q LGC+ L+ +N + +ITDN N IID Sbjct: 2 DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQ----SLGCQTTLRL-KNNETFITDNNNMIID 173
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BACCZ (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ZK / E33L) GN=rpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.542e-40 Identity = 88/181 (48.62%), Postives = 122/181 (67.40%), Query Frame = 2 Query: 215 DLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIID 757 DLK++A + A +VK GM +GLGTGST + + K+GQ +K G I +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK ++Q LGC+ L+ +N + +ITDN N IID Sbjct: 2 DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIIDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQ----SLGCQTTLRL-KNNETFITDNNNMIID 173
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BACHK (Ribose-5-phosphate isomerase A OS=Bacillus thuringiensis subsp. konkukian GN=rpiA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.626e-40 Identity = 87/181 (48.07%), Postives = 122/181 (67.40%), Query Frame = 2 Query: 215 DLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIID 757 DLK++A + A +VK GM +GLGTGST + + K+GQ +K G I +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK ++Q LGC+ L+ +N + +ITDN N I+D Sbjct: 2 DLKQIAGEYAATFVKDGMKVGLGTGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQ----SLGCQTTLRL-KNNETFITDNNNMIVD 173
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_PARL1 (Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpiA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.041e-40 Identity = 90/187 (48.13%), Postives = 122/187 (65.24%), Query Frame = 2 Query: 203 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKL--KEGENGKPYITDNFNYIID 757 + DD KK AA +A+++VK GM LG+GTGST V +G+ +K G DIVG+PTS+RT + A SL IPLT LDD P LD+ +DGADE+D +L L+KG GGALLREK+V AS +V+AD SKLV LG +PVEV+ F ++ ++ GC K+ + E G+P+ TD+ N+I D Sbjct: 1 MNADDQKKAAAVRALEFVKPGMKLGMGTGSTAEHFVRALGEKVKAG--LDIVGVPTSERTAKLAASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVIADASKLVKTLG--SFPLPVEVIPFGSAVTARKIAEVASAHGCTGKMSRRADEYGEPFFTDSENFIYD 183
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_NITHX (Ribose-5-phosphate isomerase A OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.346e-39 Identity = 85/190 (44.74%), Postives = 128/190 (67.37%), Query Frame = 2 Query: 203 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKL--KEGENGKPYITDNFNYIIDLYI 766 +T D LK+ AA +A++YV+ GM LGLGTGST V+ +G+ ++ G +VG+PTS+ T A+ IPLTTLDD LDL +DGADE+DP+LNL+KG GGALLREK+V AAS+ +V+ADE+K V+GLG + +P+EV+ F + + F + G ++ ++G +G ++TD ++I D ++ Sbjct: 1 MTLDALKRQAAARALEYVEDGMRLGLGTGSTAKHFVELLGERVRDG--LKVVGVPTSEATRADAERCGIPLTTLDDLDRLDLTVDGADEIDPDLNLIKGGGGALLREKIVAAASERMIVIADETKWVAGLG--RFPLPIEVIPFGLAATRRAIAEAFTKAGASGQMVVRKGPDGLAFVTDGGHWIFDAHL 186
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BACC1 (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 10987) GN=rpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.346e-39 Identity = 89/181 (49.17%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 215 DLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIID 757 +LK+LA + A +VK GM +GLGTGST + ++K+G+ +K G +PTSK TE A+ LNIPL +L+D SLDL IDGADE+D L+L+KG GGALLREK+V ++SK +++ADESKLV+ LG +PVE++ F WK ++Q LGC+ L+ +N + +ITDN N IID Sbjct: 2 NLKQLAGEYAATFVKDGMKIGLGTGSTVYWTIEKLGERVKEG--LSFQAVPTSKETEVLAQQLNIPLISLNDIQSLDLTIDGADEIDSNLHLIKGGGGALLREKIVASSSKELLIIADESKLVTHLG--TFPLPVEIIPFSWKQTESKIQ----SLGCQTTLRL-KNNETFITDNNNMIID 173 The following BLAST results are available for this feature:
BLAST of CB290908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290908 ID=CB290908; Name=CB290908; organism=Citrus sinensis; type=EST; length=780bpback to top |