CB290998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290998 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 3.468e-46 Identity = 88/133 (66.17%), Postives = 109/133 (81.95%), Query Frame = -3 Query: 373 RTKSKFVFSGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 771 RT+SK V +GPSKSA+T+FKYIAPEQVPV+YGGLS++ T + +TE +VKPA+ YT+E+P +E L WELRVLG DVSYGA+F P+ EGSY VIVSKTRK+ TDEPVI D+FK+GEPGK+V+TIDNQ Sbjct: 430 RTRSKMVLAGPSKSADTIFKYIAPEQVPVKYGGLSKDTP---LTEETITEAIVKPAANYTIELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQ 559
BLAST of CB290998 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 93/133 (69.92%), Postives = 105/133 (78.95%), Query Frame = -3 Query: 373 RTKSKFVFSGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 771 RT+SK V SGPSKSAET+FKY+APE VPV+YGGLS++ FT D VTE VVK SKYT+++P TE S L WELRVLG DVSYGA+F PS E SYTVIVSK RKV TDEPVI D+FK E GKVV+TIDNQ Sbjct: 538 RTRSKMVLSGPSKSAETIFKYVAPEVVPVKYGGLSKDSP--FTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQ 668
BLAST of CB290998 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 6.122e-43 Identity = 83/143 (58.04%), Postives = 110/143 (76.92%), Query Frame = -3 Query: 376 MISPFLTQRTKSKFVFSGPSKSAETLFKYIAPEQVPVQYGGLSREG---EQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 795 +I PF+T R+KSK VF+GPS+SAETLFKYI+PEQVPVQYGGLS + +F+ D +E+ VKP +K TVEI + E+ LVWE+RV GW+VSY AEFVP + +YTV++ K RK+ P+DEPV+ +FK+ E GKV+LT+DN Sbjct: 331 VIGPFMTPRSKSKLVFAGPSRSAETLFKYISPEQVPVQYGGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEIIIYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDN 473
BLAST of CB290998 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.364e-42 Identity = 83/144 (57.64%), Postives = 110/144 (76.39%), Query Frame = -3 Query: 376 RMISPFLTQRTKSKFVFSGPSKSAETLFKYIAPEQVPVQYGGLSREG---EQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 798 R+ISPF++QR+KSK VF+GPS+SAETL KYI+PE VPVQYGGLS + +FT D TE+ VKP +K TVEI V E+ +VWE+RV+GW+VSYGAEFVP + YTVI+ K RK+ +E V+ +FK+GE G+++LT+DN Sbjct: 505 RIISPFMSQRSKSKLVFAGPSRSAETLLKYISPEHVPVQYGGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDN 648
BLAST of CB290998 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.047e-34 Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = -3 Query: 376 MISPFLTQRTKSKFVFSGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTE-RSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 795 ++SPFLTQRTKSKFV + P+K ETL KYI +++PVQYGG + EF + + V+EVVVKP S T+EIP E LVW++ VLGW+V+Y EFVP+ EG+YTVIV K +K+ + P I ++FK + GK+VLT+DN Sbjct: 382 VLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDDTEF-SNETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGP-IRNSFKNSQAGKIVLTVDN 520
BLAST of CB290998 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 67/141 (47.52%), Postives = 94/141 (66.67%), Query Frame = -3 Query: 376 MISPFLTQRTKSKFVFSGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTE-RSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 795 M SPFLTQRTKSKFV S +AETL+K+I PE +PVQYGGLSR + + P +E +K K ++I E + + W++ V GWD+ Y AEFVP+AE SY ++V K +K+ TDE +C++F E GK++L++DN Sbjct: 248 MFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDE-AVCNSFTTVEAGKLILSVDN 387 The following BLAST results are available for this feature:
BLAST of CB290998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290998 ID=CB290998; Name=CB290998; organism=Citrus sinensis; type=EST; length=800bpback to top |