CB291000

Overview
NameCB291000
Unique NameCB291000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB291000 vs. ExPASy Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.996e-12
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = -2 
Query:  612 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVADDMATD 824
            WT+EEH  FL G+Q  GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ   T+ KR  S+ D+   D+  D
Sbjct:  379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SIHDLSLQDLIDD 446
The following BLAST results are available for this feature:
BLAST of CB291000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYBJ_DICDI5.996e-1250.70Myb-like protein J OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_02ah02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ah02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291000 ID=CB291000; Name=CB291000; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTTAAAAAAAAAAAACAAGATTCCATTGCATAAAAT
ATAATTGTACAAAAATAGAAAATCATTTCCATCCATTCAAACTGCTTGTA
TTGGGGTCGTCTTGCCCTTGCTTAAATCCGACCTGCTGACTGGGGCATTT
GCGTGGAAAGCTGACTGCCTCGACGGCTCTCCCAGTAGTTTCAAGGAAAG
AGGTGAAGGCTCTCTGAGGCCTCTTTCAGTCTCTCCTATACTCAGTTGAA
ACATGCCAACTAGTTGATCTACATTGACGGGTTCTTTAGGAAGGATTGGA
ATTGGCTTAAGGATCGGATGATTACCAGAAGTCCCTGCATCCTTATCTTC
TTCCCCAGTGGCTGCATTATGTGGCCAATATGTATAAGGGACTGGCATAT
ATGCTGGGAAGAAACTGGAAACCATTGGGGTGAACTCATTCAAATCAATC
ACAGGTTCTTCAGAATCCTTCTCTGTTTCTTTACATACGGCTTCCATGGG
TTCAAATTCGGTACTCAGAGAAAGATTTAGAGAAGGTTGTGAGCTTGTAT
TGTCAAATTCTCTGGCAAGAGGAGATGGAAGCATTATTTGCTCTTCTGGC
ACCAGTGGGGTATCTGTGGCCATATCATCCGCAACCATGTCAAAAAGACT
GGAGCGCCTCTTTCTTCGAGTAGCATTACTCTGCCGGATAAAATACTTCT
GAGCATGACTTGCCACCTGGGTTGGAGTCCTGGACATGACATAATTTCGT
GCTATACCACGCCAGTCTCCCTTCCCTAATTTCTGAAGGCCAATTAGAAA
CAGGCGATGCTCCTCTTCTGTCCATGGGACACCT
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