CB291004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.056e-42 Identity = 82/136 (60.29%), Postives = 102/136 (75.00%), Query Frame = -3 Query: 189 LLVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 596 LLVFLD KV E S KFDEHAPP+AK+V +Q H LI A++KAQ+ V EA+TGGP+AA +YAA E+K +VTNSVK W KLN Y H M D A+P AA +S +YN LV +MT GY + GYLPLVP+DDI KA+++ Sbjct: 73 LLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.618e-17 Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = -3 Query: 189 DLLVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGG-----------------PRAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFKQ 599 ++L ++D+KVD + + D PP+ K+V++Q S + A A+ L SE + G P A YA E K +V AW KLN LF +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP + I+K F + Sbjct: 81 EVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPK--AEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.299e-16 Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = -3 Query: 192 DLLVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGP---------------RAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAFK 599 +LL+F+D+KV+ + + + H P L KR + Q ++ + A + A + SE Q G ++++ + +V AW LN LF +A + VPTAA WS+KYN V ++GY V YLPL+P + IAK F+ Sbjct: 79 ELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQ 229
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15 Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = -3 Query: 195 DLLVFLDKKVDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 599 +LL + D+KV E D H P K+V+SQ A+++VSE + G ++++ +V AW KLN LF +A+ +P AA ++KYN ++V +KGY V YLPLVP + IAK F Sbjct: 45 ELLKYADRKVGE----LDRHVPSNVKKVSSQ-----------ARSVVSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.756e-13 Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = -3 Query: 195 FLDKKVDEASRKFDEHAPPLAKRVASQVHSLIETASQKAQNLVSEAQTGGPRAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 587 F+DK VD + D PP+ K+V++Q +S+ + A + ++ S G + A + +V W LN L +A++ VPTA +S+KYN +V T++GY V YLPL+P + I K F Sbjct: 69 FVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVF 199
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = -3 Query: 195 DLLVFLDKKVDEASRKFDEHAPP-------LAKRVASQVHS--LIETASQKAQNLVSEAQTGGPRAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 599 DLL FLD+KV E+ ++ D PP LA+ A++V L+ TA+ A++ ++ A+ PRA Y ++ + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 94 DLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYT--RYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232
BLAST of CB291004 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = -3 Query: 195 DLLVFLDKKVDEASRKFDEHAPP-------LAKRVASQVHS--LIETASQKAQNLVSEAQTGGPRAAVHYAAAEFKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYPVFGYLPLVPIDDIAKAF 599 DLL FLD+KV E+ ++ D PP LA+ A++V L+ TA+ A++ ++ A+ PRA Y ++ + + +AW LN L ++ +P AA S +YN V + K+G V YLPLVP + +++ F Sbjct: 94 DLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAE---PRARDLYT--RYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232 The following BLAST results are available for this feature:
BLAST of CB291004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB291004 ID=CB291004; Name=CB291004; organism=Citrus sinensis; type=EST; length=601bpback to top |