CB291007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291007 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.019e-18 Identity = 65/218 (29.82%), Postives = 93/218 (42.66%), Query Frame = 3 Query: 135 TLDPDPQFGVSSKDITISQNPAISTRLYLPKLTQPHQKLAIL--------------VYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFE-RFFIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSESDGSDNY 743 T + +P GV S D+ I + + +R+Y P Q +IL ++FHG +F SA S + LV + + VS+ YR APE P AY+D W A WV N WL + D + F+ GDSSGGNI HN+A++AG+ +G+ +LG L +P F G+ SE Y Sbjct: 54 TANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWV------------------------NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE----------SGIDVLGNILLNPMFGGNERTESEKSLDGKY 237
BLAST of CB291007 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.359e-17 Identity = 69/243 (28.40%), Postives = 104/243 (42.80%), Query Frame = 3 Query: 27 MAASTNKEVTKELLPLIRVFKDGSVE---RLMDSAYVPPTLDPDPQFGVSSKDITISQNPAISTRLYLPKLTQPHQKLAILVYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFERF-FIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSESDGSDNY 743 +A +++V PL VF V+ L+ Y P +L + G T+ +ST +P +L++FHG +F SA S + + LV+ V+ VS++YR +PE+ P AY+D W A WV S WL + D + ++ GDSSGGNI HN+A++A ++ GV++LG L HP F G SE Y Sbjct: 45 LAEFLDRKVPANSFPLDGVFSFDHVDSTTNLLTRIYQPASLLHQTRHG------TLELTKPLSTTEIVP----------VLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS------------------------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNE----------GVKVLGNILLHPMFGGQERTQSEKTLDGKY 237
BLAST of CB291007 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17 Identity = 62/213 (29.11%), Postives = 95/213 (44.60%), Query Frame = 3 Query: 150 PQFGVSSKDITISQNPAISTRLY-----------LPKLTQP----------HQKLAILVYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFE-RFFIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSE 722 P GVSS D I Q+ + R+Y +T+P + ++++FHG +F SA S + V S+ + VS+ YR APE+ P AY+D W A +WV S +P++ + GD + R F+ GDSSGGNI H++A++A D+ GV++ G L + F G+ SE Sbjct: 59 PLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS------------------------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE----------GVKVCGNILLNAMFGGTERTESE 237
BLAST of CB291007 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.268e-16 Identity = 63/205 (30.73%), Postives = 92/205 (44.88%), Query Frame = 3 Query: 147 DPQFGVSSKDITISQNPAISTRLYLPK----------LTQP--HQKLAILVYFHGSAFCMESAFSFLQHRYLNTLVSQSQVLAVSIEYRLAPEYLLPAAYEDCWAAFQWVASHRNRNSINHHDPDHQNHSNIINNKEPWLLNHGDFE-RFFIGGDSSGGNIVHNIAMKAGDDDQESLLKEGTGVRILGAFLGHPYFWGSVPVGSE 722 +P GV S D+ I + + +R+Y P L P + + ++V+FHG +F SA S + LV + VS+ YR APE P AY+D WA +WV N WL + D + R F+ GDSSGGNIVHN+A++A + + + +LG L +P F G+ SE Sbjct: 58 NPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV------------------------NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE----------SRIDVLGNILLNPMFGGTERTESE 228 The following BLAST results are available for this feature:
BLAST of CB291007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB291007 ID=CB291007; Name=CB291007; organism=Citrus sinensis; type=EST; length=794bpback to top |