CB291009
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.447e-17 Identity = 64/217 (29.49%), Postives = 101/217 (46.54%), Query Frame = 1 Query: 208 RIAYCGLFALSLIVSWIL-REVAAPLMEKLPWINH----FHKTPSREWFETD------AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPNEIVGFYES----ISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLNTFFIVMTLILAFI 798 R+ Y + LS +VS+I+ R+ ++K+P H+ + D AV R++ +FF + S+LM VK KDPR ++H+G W KI + + F++P G++ S + G+ H WNE+WV E+ WY ALL + Y+L+ GLL+ ++T P G C N FFI + LIL + Sbjct: 39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDPRAAVHNGFWFFKIAALIGIMVGSFYIPG---GYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINLILCVV 250
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16 Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPNEIVGFYES----ISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLNTFFIVMTLILAFI 798 AV R++ +FF S+LM+ VK KDPR ++H+G W KI + + F++P G + + I G+ H WNE+WV E+ WY ALL V+ + Y+L+ F+GLL+ ++T P G C N FFI LIL + Sbjct: 96 AVYRISFALAVFFFAFSLLMLNVKTSKDPRAAIHNGFWFFKIAAIVGVMVGSFYIPG---GHFNTAWFVIGMVGAAFFILIQLVLLVDFAHSWNESWVNRMEEGNPKCWYAALLSVTSLFYILSIIFAGLLYTYYTKPDG--CTENKFFISFNLILCVV 249
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 63/217 (29.03%), Postives = 100/217 (46.08%), Query Frame = 1 Query: 208 RIAYCGLFALSLIVSWIL-REVAAPLMEKLPWINH----FHKTPSREWFETD------AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPNEIVGFYES----ISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLNTFFIVMTLILAFI 798 R+ Y + LS +VS+I+ R+ ++K+P H+ + D AV R++ +FF + S+LM VK KD R ++H+G W KI + + F++P G++ S + G+ H WNE+WV E+ WY ALL + Y+L+ GLL+ ++T P G C N FFI + LIL + Sbjct: 39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPG---GYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINLILCVV 250
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14 Identity = 65/225 (28.89%), Postives = 99/225 (44.00%), Query Frame = 1 Query: 202 SARIAYCGLFALSLIVSWIL--REVAAPLMEKLPWINHFHKTPSR----------------EWFETDAVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPNE--IVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ------FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLILAFI 798 S RI Y LF LS I +WI+ ++V+ LM+ + +H T R W E V+R+ LF LS+ +GV + KDPR SLH+G W +K+I + FF+ N I + I G+ + WN++WVG E+ F L+ +++ + L+FH++T DC L+ FFI L LA + Sbjct: 43 STRITYAILFFLSSIAAWIMLDKDVSKGLMK----VCCYHSTLFRLVLFTQPAIKTTTNVVPWGEL-GVMRIMFSVCLFHLFLSLCTIGVSSSKDPRSSLHNGMWFIKLILLVGAMVGSFFISNSFFIGASWSWIGLVGAVLFMIVQFILLVDFAYSWNDSWVGKLEEGSKCAGFGSYRLISATVMLMAFVITLTVLMFHFYT--NGDCKLSNFFIGFNLALALL 260
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC3_MOUSE (Serine incorporator 3 OS=Mus musculus GN=Serinc3 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.896e-13 Identity = 47/151 (31.13%), Postives = 69/151 (45.70%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLP-NEIVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLI 786 AV R+ +FF +LM+ VK KDPR ++H+G W KI + I F++P + G+ H WNE WV E+ WY ALL + + Y+L+ F+ LL+ ++T DC N FI + LI Sbjct: 97 AVYRINFAVAIFFFAFFLLMLKVKTSKDPRAAVHNGFWFFKIAAIIGIMIGSFYIPGGSFTEVWFVAGMLGASFFIIIQLVLLVDMAHSWNELWVNRMEEGNPRLWYAALLSFTSLFYILSIVFAALLYVFYT-KPDDCTENKVFISLNLI 246
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC1_BOVIN (Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPN---EIVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLIL 789 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K + I FF+P V FY + G+ H WNE+WV E+ WY ALL + + Y+L+ L F ++T C N FI + ++L Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAIHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAVVLFFVYYTHPA-SCAENKAFISVNMLL 239
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPN---EIVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLIL 789 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K + I FF+P V FY + G+ H WNE+WV E+ WY ALL + + Y+L+ L F ++T C N FI + ++L Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPA-SCSENKAFISVNMLL 239
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC1_HUMAN (Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPN---EIVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLIL 789 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K + I FF+P V FY + G+ H WNE+WV E+ WY ALL + + Y+L+ L F ++T C N FI + ++L Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPA-SCSENKAFISVNMLL 239
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC1_MOUSE (Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.307e-12 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPN---EIVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLIL 789 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K + I FF+P V FY + G+ H WNE+WV E+ WY ALL + + Y+L+ L F ++T C N FI + ++L Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAVVLFFVYYTHPA-SCAENKAFISVNMLL 239
BLAST of CB291009 vs. ExPASy Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 349 AVLRVTLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLEIFMFFLPN---EIVGFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLIL 789 AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W K + I FF+P V FY + G+ H WNE+WV E+ WY ALL + + Y+L+ L F ++T C N FI + ++L Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTFTTVWFY--VGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIILFFVYYTHPA-SCSENKAFISVNMLL 239 The following BLAST results are available for this feature:
BLAST of CB291009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291009 ID=CB291009; Name=CB291009; organism=Citrus sinensis; type=EST; length=802bpback to top |