CB291016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291016 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.793e-34 Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = -2 Query: 48 PRRMSTGFSEVFAFSGPPPHRINGRLAMIGFLAPLGVEISKVQDVFAHLSDGGVAWFLGTSVLFTVASLVPFFKGVSVDFKSDGFMTSDPHSRNGRFAILALVFWAFPDFVKGGPLV 398 P +MST FS++ AFSGP P RINGRLAMIGF+A +GVEI+K Q + LS GGVAWFLGTSVL ++ASL+PFF+GVSV+ KS M+SD NGR A+L LV AF +FVKG LV Sbjct: 80 PPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
BLAST of CB291016 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.799e-26 Identity = 54/108 (50.00%), Postives = 80/108 (74.07%), Query Frame = -2 Query: 48 EVFAFSGPPPHRINGRLAMIGFLAPLGVEISKVQDVFAHLSDGGVAWFLGTSVLFTVASLVPFFKGVSVDFKSDGFMTSDPHSRNGRFAILALVFWAFPDFVKGGPLV 371 ++F+F G P RINGR AMIGF+A +GVE++ +DVF+ + +GGV WFL TS + +A+L+P ++G+S + K++GF SD NGRFA++ LV AF ++VKGGPL+ Sbjct: 90 DLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
BLAST of CB291016 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.711e-21 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = -2 Query: 48 EVFAFSGPPPHRINGRLAMIGFLAPLGVEISKVQDVFAHLS--DGGVAWFLGTSVLFTVASLVPFFKGVSVDFKSDGFMTSDPHSRNGRFAILALVFWAFPDFVKGGPLV 371 + AFSGP P RINGRLAM+GF+A L VE ++ + + G+AWFL T+ +F+VASL+P +G SV+ KS G ++D NGRFA+L LV A +F+ G P V Sbjct: 120 DALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
BLAST of CB291016 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.664e-18 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 48 RMSTGFSEVFAFSGPPPHRINGRLAMIGFLAPLGVEISKVQDVFAHLSDG-GVAWFLGTSVLFTVASLVPFFKGVSVDFKSDGFMTSDPHSRNGRFAILALVFWAFPDFVKGGPLV 392 + ST + AFSGP P RINGRLAM+GF+ L VE + + + L G G AWF T + ++ASLVP +G S + ++ M ++ NGRFA+L LV A + + G P + Sbjct: 55 KASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170
BLAST of CB291016 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.786e-18 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 48 RMSTGFSEVFAFSGPPPHRINGRLAMIGFLAPLGVEISKVQDVFAHLSDG-GVAWFLGTSVLFTVASLVPFFKGVSVDFKSDGFMTSDPHSRNGRFAILALVFWAFPDFVKGGPLV 392 + ST + AFSGP P RINGRLAM+GF+ L VE + + + L G G AWF T + ++ASLVP +G S + ++ M ++ NGRFA++ LV A + + G P + Sbjct: 50 KASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGTPFI 165 The following BLAST results are available for this feature:
BLAST of CB291016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB291016 ID=CB291016; Name=CB291016; organism=Citrus sinensis; type=EST; length=399bpback to top |