CB291031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_PRUAR (60S ribosomal protein L12 OS=Prunus armeniaca GN=RPL12 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.227e-76 Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = -2 Query: 273 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIPLD 752 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTK IK +G+I+LDDVIEIAK+M+ RSMAK+L+GTVKEIL TCVSVGCTVDGKDP+DLQQEI DGDVEIPLD Sbjct: 7 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHRSMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL123_ARATH (60S ribosomal protein L12-3 OS=Arabidopsis thaliana GN=RPL12C PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.444e-75 Identity = 140/158 (88.61%), Postives = 151/158 (95.57%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 PSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK K IK NGNI+ DDVIEIAK+MRPRS+AK+LSGTVKEILGTCVSVGCTVDGKDP+DLQ+EI GD++IP Sbjct: 7 PSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIP 164
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL121_ARATH (60S ribosomal protein L12-1 OS=Arabidopsis thaliana GN=RPL12A PE=1 SV=2) HSP 1 Score: 280.796 bits (717), Expect = 5.486e-75 Identity = 139/158 (87.97%), Postives = 151/158 (95.57%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 PSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK K IK NGNI+ DDV EIA++MRPRS+AK+LSGTV+EILGTCVSVGCTVDGKDP+D+QQEI DG+VEIP Sbjct: 7 PSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL122_ARATH (60S ribosomal protein L12-2 OS=Arabidopsis thaliana GN=RPL12B PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.222e-74 Identity = 138/158 (87.34%), Postives = 151/158 (95.57%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 PSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK K IK NGNI+ DDV EIA++MRPRS+AK+LSGTV+EILGTCVSVGCTVDGKDP+DLQQEI +G++EIP Sbjct: 7 PSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_CHLRE (60S ribosomal protein L12 (Fragment) OS=Chlamydomonas reinhardtii GN=RPL12 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.824e-63 Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = -2 Query: 279 VVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 743 VV+V VRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQAK++V+PSAAALVIKALKEP RDRKK K IK G++T+ D+IEIA+VMRPRS AKDL+ KEILGT VSVGC VDGKDPRD+ I DG +EIP Sbjct: 1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIP 155
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_SCHPO (60S ribosomal protein L12 OS=Schizosaccharomyces pombe GN=rpl1201 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.198e-59 Identity = 110/158 (69.62%), Postives = 137/158 (86.71%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 P++V +++R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVTVKLT+QNRQA V+VVPSA+ALVIKALKEP RDRKK K + +GN++LD++IE+A+ MR +S+AK+LSGTVKEILGT SVGCTVDGK+P D+Q+EI +G++EIP Sbjct: 7 PNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVTVKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKSLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_CAEEL (60S ribosomal protein L12 OS=Caenorhabditis elegans GN=rpl-12 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.737e-57 Identity = 105/158 (66.46%), Postives = 133/158 (84.18%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 P+++ VY+R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT KLT+QNR AK+ VVPSAA+L++K LKEP RDRKK K +K NG++T+D +I+IA++MRPRSMAK L GTVKEILGT SVGCT+DG+ P D+ + I +G++EIP Sbjct: 7 PTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_CAEBR (60S ribosomal protein L12 OS=Caenorhabditis briggsae GN=rpl-12 PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.737e-57 Identity = 105/158 (66.46%), Postives = 133/158 (84.18%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 P+++ VY+R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT KLT+QNR AK+ VVPSAA+L++K LKEP RDRKK K +K NG++T+D +I+IA++MRPRSMAK L GTVKEILGT SVGCT+DG+ P D+ + I +G++EIP Sbjct: 7 PTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_RAT (60S ribosomal protein L12 OS=Rattus norvegicus GN=Rpl12 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.799e-57 Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 P+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK K IK NGNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 7 PNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CB291031 vs. ExPASy Swiss-Prot
Match: RL12_MOUSE (60S ribosomal protein L12 OS=Mus musculus GN=Rpl12 PE=1 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.560e-56 Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = -2 Query: 279 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKTIKPNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 752 P++V VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK K IK +GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 7 PNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163 The following BLAST results are available for this feature:
BLAST of CB291031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291031 ID=CB291031; Name=CB291031; organism=Citrus sinensis; type=EST; length=753bpback to top |