CB291037

Overview
NameCB291037
Unique NameCB291037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.687e-92
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            ARSKKACIVF+DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRA RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  256 ARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 425
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.687e-92
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            ARSKKACIVF+DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRA RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  257 ARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.946e-91
Identity = 166/170 (97.65%), Postives = 168/170 (98.82%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            ARSKKACIVF+DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRA RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  257 ARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.946e-91
Identity = 166/170 (97.65%), Postives = 168/170 (98.82%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            ARSKKACIVF+DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRA RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  257 ARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 1.264e-82
Identity = 151/169 (89.35%), Postives = 159/169 (94.08%), Query Frame = -1 
Query:  259 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 765
            ARSKKACI+F+DE+DAIGGARFDDGVG DNEVQRTMLEI+ QLDGFDARGNIKVLMATNRPD LDPALLRPGRLDRKVEF LPDLE RTQIFKIHTRTM+CERDIRFELLA LCPNSTGADIRSVC EAGM+AI A RK+VTEKDFLDAVNKV+KGYQKFSATPKYM Y
Sbjct:  294 ARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAY 462
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.311e-81
Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            AR+KKAC++F+DE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRA RK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  264 ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 6.936e-81
Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            AR+KKAC++F+DE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRA RK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  264 ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 300.442 bits (768), Expect = 6.936e-81
Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            AR+KKAC++F+DE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRA RK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  264 ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 6.936e-81
Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            AR+KKAC++F+DE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRA RK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  264 ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 6.936e-81
Identity = 143/170 (84.12%), Postives = 157/170 (92.35%), Query Frame = -1 
Query:  256 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 765
            AR+KKAC++F+DE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRA RK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  264 ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
The following BLAST results are available for this feature:
BLAST of CB291037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
PRS7_PRUPE6.687e-9298.2426S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH6.687e-9298.2426S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS7_SPIOL1.946e-9197.6526S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ1.946e-9197.6526S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7B_ARATH1.264e-8289.3526S protease regulatory subunit 7 homolog B OS=Ara... [more]
PRS7_XENLA5.311e-8184.1226S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_RAT6.936e-8184.1226S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_MOUSE6.936e-8184.1226S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA6.936e-8184.1226S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN6.936e-8184.1226S protease regulatory subunit 7 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ba10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291037 ID=CB291037; Name=CB291037; organism=Citrus sinensis; type=EST; length=765bp
TTTTTTTAGAAAGAAATATTCATAAAATAATTTAATCGTTTGTTCTAACA
GAAATTGGAAAATCCACGTAATTATGACATCATACAAAATGGTTCTTGAG
AGGGCAAATGTTACGCAAACACAGCAAGTTTAAACAACAGAGAATCAAAT
TGATGGGACAGCCTCTCAAAGGAACTTCATGATCTTGGATAACCCTCTGA
GAAGGTGGAACAATTGCGTCCAAGCATCTCTCCAAAAAGAAAAACATCGG
AATCAATTGTAGACCATATATTTAGGCGTTGCACTGAACTTTTGATATCC
CTTGATGACTTTGTTCACTGCATCGAGGAAGTCTTTCTCTGTCACTGTTT
TTCTTCATGCCCGGATGGCAAACATCCCAGCTTCTGTGCATACACTCCTT
ATATCAGCTCCGGTGGAATTGGGGCAAAGCCTAGCCAATAGCTCAAAGCG
GATATCTCTTTCACAGTTCATTGTTCGCGTGTGGATCTTAAATATCTGTG
TCCGGCTCTCCAAATCAGGAAGGCCAAACTCAACCTTACGATCTAATCGT
CCGGGACGCAACAGGGCCGGATCAAGTGTGTCAGGCCTGTTTGTTGCCAT
TAGAACTTTGATATTTCCACGAGCATCAAACCCATCAAGCTGATTCACAA
TTTCAAGCATTGTGCGTTGAACCTCGTTGTCCCCGCCAACACCATCATCA
AAACGTGCACCTCCTATAGCATCAACTTCATCATAGAAGACAATACAAGC
CTTCTTTGAACGTGC
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