CB291043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_DANRE (Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.185e-20 Identity = 47/129 (36.43%), Postives = 73/129 (56.59%), Query Frame = -3 Query: 406 FSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRH--PSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 786 +S+ L +R+ +R A MV L+ T+H+ YL F DYG+NM + + LL W W + R P W+ +VV LLE+ DFPP + LDAHA+WH +T+P+ ++++SF+ DD+ Sbjct: 174 YSIYLCCVRTLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLNRRILPYWWRCGMVVLLLHGLALLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_XENLA (Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.436e-17 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = -3 Query: 406 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITR--HPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 783 S+ L +R+F ++ + A L+ HI YL + DY +NM + L+ W W R P WK +VV LLE+ DFPP LDAHA+WH +TIPL ++++SF+RDD+ Sbjct: 174 SIYLCCMRTFGLQYPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQPYLWKCVLVVVLLQSLALLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_XENTR (Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.657e-16 Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = -3 Query: 406 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITR--HPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 783 S+ L +R+F ++ + A L+ H+ YL + DY +NM V L+ W W R P WK +VV LLE+ DFPP LDAHA+WH +T+PL ++++SF++DD+ Sbjct: 174 SIYLCCMRTFGLQYPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQPYLWKCVLVVISLQSLALLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_HUMAN (Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16 Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = -3 Query: 406 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWA--GITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 783 S+ L +R+ ++ A A LL +T H+ YL+ + DYG+N+ V + + ++ W W R P K VVV LLE+ DFPP + LDAHAIWH +TIP+ +++SF+ DD+ Sbjct: 179 SIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 306
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_MOUSE (Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.295e-16 Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = -3 Query: 406 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITR----HPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 783 S+ L +R+ ++ + A LL +T HI YL+ DYG+NM V + + L W W R H R + VV+ G LLE+ DFPP + LDAHAIWH +TIP+ +++ F+ DD+ Sbjct: 179 SVYLCCVRTVGLQHPSVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPHTRRCMVVVVLLQGL--SLLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_BOVIN (Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.831e-15 Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = -3 Query: 370 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWA-GITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 783 S+ L +R+ ++ A A LL +T H+ YL+ DYG+NM V + + W W R P K VV LLE+ DFPP + LDAHAIWH +TIP+ +++SF+ DD+ + K K Sbjct: 179 SIYLCCVRTVGLQHPAMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWNQRLPHVHKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEAKVK 317
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PER1_SCHPO (Protein PER1 homolog OS=Schizosaccharomyces pombe GN=SPAC823.07 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.187e-14 Identity = 36/107 (33.64%), Postives = 62/107 (57.94%), Query Frame = -3 Query: 418 MVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHP----SRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFI 726 ++ +A H+ YL+FY DYG+NMK V + + Q ++W ++ R+ +RW ++V LA LE++DF P +DAHA+WH +T+P+T+ + F+ Sbjct: 204 IIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYWTRWPAYIVT-SLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFV 309
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_CRIGR (Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14 Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = -3 Query: 406 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWA--GITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 783 S+ L +R+ ++ + A LL + H YL+ + DY +NM V + + L W W R P K VV LLE+ DFPP + LDAHAIWH +TIP+ +++ F+ DD+ Sbjct: 179 SIYLCCVRTVGLQHPSVARAFGATLLLMLLLHTSYLSLVRFDYSYNMMANVAIGLVNLAWWLAWCLRNHRRLPHTRKCVAVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFRFLEDDS 306
BLAST of CB291043 vs. ExPASy Swiss-Prot
Match: PGAP3_DROME (Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.604e-11 Identity = 39/124 (31.45%), Postives = 61/124 (49.19%), Query Frame = -3 Query: 418 SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGI--TRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFI 783 SL + ++R + R ++ L++ + YL+ + +Y +NM V V V + W W TR P ++ ALAM LE+ DFPP LDAHA+WH TIPL +++ + Sbjct: 186 SLYVMVMRMLHRYSLFLRGVITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILRFYILMALAMSLELLDFPPILWILDAHALWHLATIPLASLYYECV 309 The following BLAST results are available for this feature:
BLAST of CB291043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB291043 ID=CB291043; Name=CB291043; organism=Citrus sinensis; type=EST; length=794bpback to top |